Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00043 ATGTCTTCTCTCGACACGGCCATCTCCTTCCCCCCTCAGTTGGAACTGGTGCAGAAGAAAGAGAGGCCCAAGCTAGCTAGCACTCGGAGCTCGGCTCAGAGCCACGACACTACTCACTTGTCCAGCTCAAACTTCAGCTGGGCATTCCTCGACTCCCTTATGTGCATGTTCTTTCCTCCTTCACTTCTCCCTGGTGTTGTCGCCGTCAACCGTCGACTTGACATCCCTGACCGAGTTACTCTGCTGCCTCGGACACTTGCTGCTCGACCACGAACCCTTTTGATTCACTTGACGATTGTGACTTCAGAGCCTTCACCAGCTGATTCGGTTTCGCTCTTGCCATCCCCCGCATGCAATGGATATGAAGTGTTCTTGAGTTTTTGTAGAGGCGAAGAGACTCCAGAATCTTTCCCTTCCTGTCTCTATTCATCTCTGAGCAAAAAAGGATATTCTGTTTTCAAAGATGATATATCAATTGAACTCTTGCAAAGTGTTCGATGTCCTAAAATTTTCATCATCATCTTCTCTAAAGACTATGCTAGTTCTCGAATGTGCCTCGAGGAACTCACAAAAATCATGAAGTTTCGCAGCATGCCATATGATCATGTAGTTCTTCCCATATTCTATGACGTGAGTCAGTCTGAAATTTGTAATCAAGAATCAATTAAAGGTCGCATACAAAAAGTTTCACCCACTGAAGAGGAGGTTTCAAGGTGGAGGAGAGCTCTTCGTGAAGCTGCGAGGAACGTTCCTGGGATTCATATATCTGATTACATCAAGTTTGGCTATCTACATGATGAGTATGTTATGGAGGATATTATCTATTATGCTGATGATTTTTTGAAGACATTGGATAAGGTGTTCCCTGTTGGAGTGGATTCTCGTGCTCAGGATGTGATTTCAATGCTTCATAACCATAAATCAAAACGTGTTGTCTTCATAGGCATATGGGGAATGAGGGGTATAGGCAAAACAACTATTGCCAAAGCTGTCTTTAACCACATTCAGTGCGCATTTGAGAGTACATGTTTTCTTCCAAATGTTGGGGAACAATCAGAGAGGAAAGTCGACCTTGTTTCAGTAATATGTAAAGCAACAGATATGAGAATAAAGAGCACTGAATCAAGAACCCTTGACTTGAATGAAAGACCTTGCCAAAAGAAGGTACTTCTTGGGCTTGACGATGTGAATCAGTTGGAGCAACTAAATACTTTATGTGGAAGTCGTGAACAGTTTGGTGAAGGGAGTATAATCATCATTACAACGAGCGATTTATATCTACTTAATGCCTTTCAAGTGGATGATATATATTGCATGAAACTTTTAAGCGACGAAGAGTCTCTTCAACTTCTCAGTTGGCATGCATTTCAACAAGCATACCCTAAAGGAGAATTCATCGATGCTTGCAAAGAAGTGGTTGTTTATGCTGAGGGACTACCACTGGCTCTCACTACAGACATTGACTCTATTTTGAATGAGGAGGAATTGGACCAACGGGAATCCATATTGTGGAATATGAATAGAGCTCTCCATCCTGTTATATACAACAAACTAAGGCTTAGCTTTGACTATTTAAATGCTGAAGAGAAAGAAATATTTCTAAATATAGTTTTATTCCATATTGGGAGGGACATGGATGATGTGATCCAAAAGCTGAATGCCCATGGAAGCAATGCTCATATTAGGATACGAGTCCTGGAGGATCGAGGACTTGTAACCATTGATAACAACAAATTTAGAATGCATAATCTATTGCAGGTCATGGGAAGGCAAATAGTCCGTGAGACTTCACAAAGTGAGCTTGAAGGTAGGTTATGGTTTTGTAGGGATGCTTTATGTGCTTCATGTATTATATCAACGTGCCTGTATCAATGA 1875 0.4165 MSSLDTAISFPPQLELVQKKERPKLASTRSSAQSHDTTHLSSSNFSWAFLDSLMCMFFPPSLLPGVVAVNRRLDIPDRVTLLPRTLAARPRTLLIHLTIVTSEPSPADSVSLLPSPACNGYEVFLSFCRGEETPESFPSCLYSSLSKKGYSVFKDDISIELLQSVRCPKIFIIIFSKDYASSRMCLEELTKIMKFRSMPYDHVVLPIFYDVSQSEICNQESIKGRIQKVSPTEEEVSRWRRALREAARNVPGIHISDYIKFGYLHDEYVMEDIIYYADDFLKTLDKVFPVGVDSRAQDVISMLHNHKSKRVVFIGIWGMRGIGKTTIAKAVFNHIQCAFESTCFLPNVGEQSERKVDLVSVICKATDMRIKSTESRTLDLNERPCQKKVLLGLDDVNQLEQLNTLCGSREQFGEGSIIIITTSDLYLLNAFQVDDIYCMKLLSDEESLQLLSWHAFQQAYPKGEFIDACKEVVVYAEGLPLALTTDIDSILNEEELDQRESILWNMNRALHPVIYNKLRLSFDYLNAEEKEIFLNIVLFHIGRDMDDVIQKLNAHGSNAHIRIRVLEDRGLVTIDNNKFRMHNLLQVMGRQIVRETSQSELEGRLWFCRDALCASCIISTCLYQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00043 624 MobiDBLite consensus disorder prediction 19 39 - -
Pral4707g00043 624 Pfam NB-ARC domain 297 485 IPR002182 GO:0043531
Pral4707g00043 624 SUPERFAMILY Toll/Interleukin receptor TIR domain 121 247 IPR035897 -
Pral4707g00043 624 SMART till_3 120 249 IPR000157 GO:0007165
Pral4707g00043 624 SUPERFAMILY "Winged helix" DNA-binding domain 514 611 IPR036390 -
Pral4707g00043 624 Pfam TIR domain 121 248 IPR000157 GO:0007165
Pral4707g00043 624 PRINTS Disease resistance protein signature 383 397 - -
Pral4707g00043 624 PRINTS Disease resistance protein signature 313 328 - -
Pral4707g00043 624 PRINTS Disease resistance protein signature 476 490 - -
Pral4707g00043 624 ProSiteProfiles TIR domain profile. 119 284 IPR000157 GO:0007165
Pral4707g00043 624 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 121 610 IPR044974 GO:0006952
Pral4707g00043 624 Gene3D - 285 435 IPR027417 -
Pral4707g00043 624 Gene3D - 441 526 IPR042197 -
Pral4707g00043 624 Gene3D - 118 284 IPR035897 -
Pral4707g00043 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 287 535 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00043 Pral-Chr4707 835831 844536 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00043 290 606 WRKY Transcription Factor Family AT5G45050 33.333 7.13e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00043 - - pcin:129287786 387.497