Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00041 ATGTTCTTCATCATCTTATCTGAAGACTATGTTAGTTCTGGAATGTGCCTCGAGGAACTCACAAAAATCATGAAGTTTCGCAGCATGCCATATGATCATGTAGTTTTTCCCATATTCTGTGACGTGGGTCTGTCTAAAGTTTGTAATCAAGAATCTAGTTTCAAAGAAGCATTTCAAGGTCTCTTTCAAAAAGTTTCATCCACTGAAGAGCAAGTTTCACGGTGGCAGAGAGCTCACTGTGAATTTAGAAGGTACGTTGCTAGCATTGATGCGCTTGCTCACTTCAACCTCAAGTCCGCTGGGATTGATGTTTCTGCTCACCTCAAGTCTGGCTCTCTACATGATAAGGATATTGAGCCTATTGTCGGTCTTGTTGATCATTTATTATTTGATGATAAGATGTTCCCTGTTGGAGTGGATTCTCGTGCTCAGGATGTGATTACAATGCTTCATAACCATAAAACAAAAGATGTTGTCTCCATAGGGATATGGGGAATGGCGGGTATAGGCAAAACAACTATTGCCAAAGCTATCTTTAACCACATTCAGTATGAATTCGAGGGCACATGTTTTCTTCCAAATGTCAGGAAGCAATGGGGGAGAAAACTCGACCTTGTTTCAGCAATATGTAAAGCAACTGAATCAGGAAGCCTCGACTTGAATGAAAGACCTTGCCGTAAGAAGGTACTTGTTGTGCTTGACGATGTGGATAAGCTGGAGCAACTGAATACTTTATGTGAAAGTCGTGAGCAATTTGGTGAAGGGAGTACAATTATCATTACAACTAGAGATTCACGTCTATTTAATGACTTTAAAGTGGATGACACATATCGCATGAAACTTTTGAGTAACGAAGAGTCTCTTGAACTTCTCAGTTGGCACGCATTTCAACAAGCATCCCCTAAAGAAGACTTCATCAATGTTTGCGAAGAAGTGGTTGCTTTTGTTGAGGGACTACCACTGGCTCTTGAAGTCATTGTCTATGCTTCACTGTACGGGAAGCAACCGAATGAATGGAAATCCATATTGTGGAAGATGAATAGAGATCTACCTAATGGCATAGACGAGGAACTAAGCCATAGCATTGACTACTCCTTGAATGGTGAAGAGAGAGAAATATTTCTTAATATAGTTTTATTTTACATTGGAGAGCCCATGCATGATGTGGTGCGTAAGTTGGATGGCCGTGGATGTAAAGCTAGCATCGGAATAATAGCCCTGGTGGATCAAAGCCTTGTAACCATTGACGACGACAACAAACTTAGAATGCATAATCTGTTGCAGCTCATAGGAAGACAAATAATATATGAAACTCCACAATTCGAGCTTGGCAATGAAGCTTACAGGTATGATGTGTTCTTGAGTTTTAGAGGTGAAGACACTCGAACAAATTTTACTTCACATCTCTATGCGGCTCTATGTAATGCTGGTGTTTATGTTTTCAAAGATGATGTTGAGCTTTCTGAAGGAAAGTATATAAAAACAGAACTTTTGCAAGCAATTGGAAGTTCAAAAATTGCAATCATCATCTTCTCTGAGAAATATGCTGGATCTAAATGGTGTTTGGAGGAATTGTCAATGATCATGGAGCTTCATAAAACAAATAAAAGGGCGGTTCTACCTGTGTTTTACCATGTTAGTCCAAAACAAATTCGTCGTCAACCTTCCAATTTTGGTGGAGCATTTAACGATCTTGAACAAAAGAATTCACCATCAGAATATCAAGTTTCGGAGTGGAGGGAAGCCCTTTTTAGAGCTGGGTCTCTTAAAGGGACCGTCTTACATTGTTCCAGGGACGAAAGTGAATATGTTAAAGATGTTGTTCGGCAAGTTTGTGATATATTGCACAAGAAAGACTTGTTTGTCACTGAACACCCAGTAGGAGTGGATAATCGCGTGGAAGAAGTGATCACAATGTTGAAAAACCATCCGTCTGAAGATGTTGTTATGGTGGGGATATGGGGAATGGGTGGTGTAGGCAAAACAACTATTGCCAAAGCCATTTATAATCAAATGGGTCCCACTTTTGAGAGTAGAAGTTGCCTTTTAAACATAAGAGAAGCATGGGGTCAAGAAAAGGGGAAAGTGCGCTTACAGAACCAACTTCTTTCAGAAATATGCAAGACAACACAAATGAAGATAAAAAACATTGAATCAGGAAAAATCACATTGGGAGATAGACTTCGCCATATAAAGGCACTGGTTGTACTTGATGATGTGGATGAGTCAGATCAGTTGAGTGCTTTAGTTGGAAGTCATGATTGGTTTGCTCAAGGAAGTAGAATAATAATTACAACTAGAAATAGACATCTACTTAAAAAGGGCTATGTTGTTTATGTAATGAAGAATTTGGGTGATGGGGAATCTAATGAGCTTTTTAGTTGGCATGCATTCAAAGAAAAAAGTCCTCAAAAAGGTTTCATTGAAGTTTCAGAAAAAATAGTTGCATACTGTGGGGGACTTCCATTAGCTCTCACAGTCCTTGGCTCTTATTTACTGAAAATTGATGACTTGGAGGAATGGAAGAAAGTACTGAAGAAACTTAAAGAAATTCCAAATGACAAGGTACAAGAGAAGTTAAAAATAAGCTTTGACAATTTAAATGGCCTGGAGAAAGATATATTCCTTGATATATGTTGCTTCTTTATTGGGATGGACAAAAATGAAGTGACACAAATATTAGATGGTTGTCAACTTTTTGGTGACAGTGGAATCAATACCCTTGCGGAGCGAGGCCTTTTAACTATTGATGAGAACAAGCTTGGTATGCATGATTTGTTGCGGGACATGGGAAGAGAAATAATTCGTGAACAATCCCATGCACTTGGGAAGAGAAGTAGGTTATGGCTTAATGAGCATGCACGAGATGGAACTGAGGCTATTCAAGGACTGTCTTTGATGTCAGAAAGTGAAACAATGCATTTTCAGACAGAAGCATTTGAGAAGATGAAAACACTCAGATTACTTCGGCTTGGTAATGTACAGCTTAGAGGAGACTACAAATTCATCAGTAAAGATCTAAAATGGCTTTGCTGGCATCATTGTCCTGAAAAACACATTCCAAGCGACTTTTATCAAGAGGATTTGGTTGTTATTGACTTAAAGCACAGCAACTTGAGACGAGTGTGGAAGAAACCCCAGTCATTGGAAAGTTTGAAAATCCTCAATCTCAGCCACTCTCCTTACTTGGTGCAAACTCCTGATTTTTCAAAACTACCAAACCTTGAAAAGTTGATCCTCAAAGGCTGTCTACGTTTGTCCAAGATACATCATTCTATTGAGCTTCTTCATAAACTTCTTCTACTAGATCTGGAGGACTGTATTAGGCTTGATAGTCTCCCAAGAAGCGTTTATAGATTAAAATGCTTAAAAACTCTCATTCTTTCTGGTTGTGAGAATATTGAAAAGCTTGAGGAGGACATAGAGCAAATGAAATCTTTGAGAACTCTACTTGCTCCTGCAGTAAAACAAGTGCCGGTTTCTTTACTGAGATCAAAAAGCATTTTTTATCTATCTATTTGCGGTCTTAAAGGATTGTCACGTCATGTGATTCCTTCTCTCTACCGGTCTTGGATACGCCCAACAAATAATCCATTACCTCTTGTTCTAACACATACGGGCATGCCATCATCAATTTTGTCAAAGATGCTAAACAGTTTCCGTGGACGTCCTTCAACAATTCCTAATAGTGATCCAAAGCAACAAAATTTTTTGTTGGAAGATGGGTTGGAGATTTCTAATTCATTGCGTCTCACCAGTTGCATGGACATCTCAAGGCTTGAAAGTTCTTTGGGTTGTCTTTTAATTCGAATTGGAAAGAATTGTCAAGTCTCTCATGCACTTTCAGAGAGGGTTTCAGAGGGGTTGAATCTGAAAAAGTATAGTGATGATTATCTCCCTGGCCACAAATATCCCTATTGGCTAACTTTCAAGGGTGAAGGAGATTCTGTAAAATATAAAGTTCCTTCAGTTAATGGTCATGATCATTTAAAAGGGATAACTATTTGTTGTGCATATTTTCCCCCAGGTGATTTGGATAAGAAGACATGTGAATCATGTATAATCAGCTTAATGATAAGAAATTATACCAAGAGAACCACTTTGGTGTACACTAAAGACAAACTAAATTCAATGGAAGAAGCAGGGAGGAAGGAAATAATATCAAATATAGAATGTGATGACCAAGTAGAGGTGAAAGCAATCTTTGGGAATGAATTCACTGTGGAGAAAACAGCAGTCTACTTGATATATCATGAGTCATTTGACAAAGAGATGAAGTCTTCACCATCTGAAGCTACAAATTTATCCGGCGCCAAGCACAAATGTGAGGAGGAGAAGCATTTGAAATTGGGAAACTTTCTTCCCTTATTGGCTGCAACATTTTTTGTGATCTTTCTTTTCTGGTCACGAAACTTCTCATAA 4422 0.386 MFFIILSEDYVSSGMCLEELTKIMKFRSMPYDHVVFPIFCDVGLSKVCNQESSFKEAFQGLFQKVSSTEEQVSRWQRAHCEFRRYVASIDALAHFNLKSAGIDVSAHLKSGSLHDKDIEPIVGLVDHLLFDDKMFPVGVDSRAQDVITMLHNHKTKDVVSIGIWGMAGIGKTTIAKAIFNHIQYEFEGTCFLPNVRKQWGRKLDLVSAICKATESGSLDLNERPCRKKVLVVLDDVDKLEQLNTLCESREQFGEGSTIIITTRDSRLFNDFKVDDTYRMKLLSNEESLELLSWHAFQQASPKEDFINVCEEVVAFVEGLPLALEVIVYASLYGKQPNEWKSILWKMNRDLPNGIDEELSHSIDYSLNGEEREIFLNIVLFYIGEPMHDVVRKLDGRGCKASIGIIALVDQSLVTIDDDNKLRMHNLLQLIGRQIIYETPQFELGNEAYRYDVFLSFRGEDTRTNFTSHLYAALCNAGVYVFKDDVELSEGKYIKTELLQAIGSSKIAIIIFSEKYAGSKWCLEELSMIMELHKTNKRAVLPVFYHVSPKQIRRQPSNFGGAFNDLEQKNSPSEYQVSEWREALFRAGSLKGTVLHCSRDESEYVKDVVRQVCDILHKKDLFVTEHPVGVDNRVEEVITMLKNHPSEDVVMVGIWGMGGVGKTTIAKAIYNQMGPTFESRSCLLNIREAWGQEKGKVRLQNQLLSEICKTTQMKIKNIESGKITLGDRLRHIKALVVLDDVDESDQLSALVGSHDWFAQGSRIIITTRNRHLLKKGYVVYVMKNLGDGESNELFSWHAFKEKSPQKGFIEVSEKIVAYCGGLPLALTVLGSYLLKIDDLEEWKKVLKKLKEIPNDKVQEKLKISFDNLNGLEKDIFLDICCFFIGMDKNEVTQILDGCQLFGDSGINTLAERGLLTIDENKLGMHDLLRDMGREIIREQSHALGKRSRLWLNEHARDGTEAIQGLSLMSESETMHFQTEAFEKMKTLRLLRLGNVQLRGDYKFISKDLKWLCWHHCPEKHIPSDFYQEDLVVIDLKHSNLRRVWKKPQSLESLKILNLSHSPYLVQTPDFSKLPNLEKLILKGCLRLSKIHHSIELLHKLLLLDLEDCIRLDSLPRSVYRLKCLKTLILSGCENIEKLEEDIEQMKSLRTLLAPAVKQVPVSLLRSKSIFYLSICGLKGLSRHVIPSLYRSWIRPTNNPLPLVLTHTGMPSSILSKMLNSFRGRPSTIPNSDPKQQNFLLEDGLEISNSLRLTSCMDISRLESSLGCLLIRIGKNCQVSHALSERVSEGLNLKKYSDDYLPGHKYPYWLTFKGEGDSVKYKVPSVNGHDHLKGITICCAYFPPGDLDKKTCESCIISLMIRNYTKRTTLVYTKDKLNSMEEAGRKEIISNIECDDQVEVKAIFGNEFTVEKTAVYLIYHESFDKEMKSSPSEATNLSGAKHKCEEEKHLKLGNFLPLLAATFFVIFLFWSRNFS 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00041 1473 PRINTS Disease resistance protein signature 727 741 - -
Pral4707g00041 1473 PRINTS Disease resistance protein signature 1047 1063 - -
Pral4707g00041 1473 PRINTS Disease resistance protein signature 650 665 - -
Pral4707g00041 1473 PRINTS Disease resistance protein signature 818 832 - -
Pral4707g00041 1473 ProSiteProfiles TIR domain profile. 448 615 IPR000157 GO:0007165
Pral4707g00041 1473 SMART AAA_5 157 283 IPR003593 GO:0016887
Pral4707g00041 1473 SMART AAA_5 647 785 IPR003593 GO:0016887
Pral4707g00041 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 878 IPR027417 -
Pral4707g00041 1473 Gene3D - 444 621 IPR035897 -
Pral4707g00041 1473 Gene3D - 1 99 IPR035897 -
Pral4707g00041 1473 Gene3D Ribonuclease Inhibitor 958 1169 IPR032675 -
Pral4707g00041 1473 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 450 1170 IPR044974 GO:0006952
Pral4707g00041 1473 Pfam NB-ARC domain 144 363 IPR002182 GO:0043531
Pral4707g00041 1473 Pfam NB-ARC domain 631 854 IPR002182 GO:0043531
Pral4707g00041 1473 Gene3D - 130 276 IPR027417 -
Pral4707g00041 1473 Gene3D - 281 366 IPR042197 -
Pral4707g00041 1473 Gene3D - 783 868 IPR042197 -
Pral4707g00041 1473 Pfam TIR domain 4 81 IPR000157 GO:0007165
Pral4707g00041 1473 Pfam TIR domain 450 619 IPR000157 GO:0007165
Pral4707g00041 1473 SUPERFAMILY "Winged helix" DNA-binding domain 854 954 IPR036390 -
Pral4707g00041 1473 Gene3D - 622 779 IPR027417 -
Pral4707g00041 1473 SUPERFAMILY L domain-like 968 1190 - -
Pral4707g00041 1473 SMART till_3 449 589 IPR000157 GO:0007165
Pral4707g00041 1473 FunFam Disease resistance protein (TIR-NBS-LRR class) 446 617 - -
Pral4707g00041 1473 ProSiteProfiles TIR domain profile. 1 90 IPR000157 GO:0007165
Pral4707g00041 1473 SUPERFAMILY Toll/Interleukin receptor TIR domain 446 589 IPR035897 -
Pral4707g00041 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 376 IPR027417 -
Pral4707g00041 1473 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 78 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00041 Pral-Chr4707 793661 801405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00041 137 435 WRKY Transcription Factor Family AT5G45050 34.295 3.66e-39 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00041 - - pcin:129287786 1377.46