Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00039 ATGAGCTTTCAAATCGAGGTGGTCTTACCTGTGTTTTACGATGTGGATCCATCAGAAATTCGTCATCAAACTTCTAGTTTTGGAGAAGCATTTAAAGAGCTTATACGAAGAATTTCTCCACCAGAATATCAGGTTTCCAGGTGGAGGACAACCCTTGCTGAGGCTGGAGGCATTGCAGGGATTGTTGTACTTGGTTCCAGGAATGAGAGTGAAGAAGTGAAAGTTGTTATTGAGAATGTTTGTAATGTATTAGACAAGAAAGACTTGTTTGTGGCCGACCACCCAGTAGGACTAGATAATCATGTGCGAGAAGTGATCACAATGCTCCAAAGCCATCAACCTGAAGATGTTGTCATGGTTGGGATATGGGGAATGGGGGGCGTAGGCAAAACGACTATTGCCAAAGCCATTTATAATGAAATTGGTCGCTCTTTTGAGAGTAGAAGCTATCTTTCAAAGATCAGAAAAGTTTGGGATCAAAAGGAAGGCCAAGTGCGCTTACAGAATCAACTTCTTTCTGATATATGTAAGACAACAGAAATGAAGATAAATAGCATTGAATCAGGAAAGATCACATTGAGGGATAGACTTCCCCATAAAAGGGCATTGGTTGTGCTTGATGATGTGGATAAGTTGGCCCAACTGAATGCTTTAGTTGGAAGTCATGACTGGTTTAAACTAGGAAGTAAAATAATCATCACAACTAGAGATAGACGTTTGCTTCTTAAAAGGGGTTGTGATGTTTATATCGTGACGAATTTAAATGAAGGCGAATCTATTGAGCTTTTTAGTTGGCATGCATTTAAACAAGCAAGTCCCAAAAAAAATTTCAAAGAGCTTTCTAGAAATATAGTAGCATACTCAGGGGGACTTCCACTAGCTCTTGAAGTCCTTGGCTCCTATTTATTTGACAGAGAAGCAAAGGAATGGAAGAGCGTATTGGAGAAACTTAAAAAAATTCCTGACAATAAGATACAGAAGAAGCTAAAAATAAGCTATGACGGTTTAGATGATTTGGAGAAAGAAATATTTCTTGATATATGTTGCTTCTTTATTGGGATGGATAGAAATGAAGTAACACACATATTAAATGGCTGCGAATTTTTCGCTGACATTGGAATCAAAACTCTTGTGGAGCGAAGCCTTGTAACCGTTGATGAGAACAACAAGCTTGGTATGCATGATTTGTTGCGAGACATGGGTAGAGAAATAATTCGTGAACAATCTCAAAAGGAGCTTGGGAAGAGAAGTAGGTTGTGGTTTCATGAGGATGCATGTGCTGTATTATCAGAACAGATGGGAACAGAGGCCATTGAAGGACTCGCTTTAAAGATGTCACAAAGTGAAAAAATGCATTTTCAGGCAGAAGCATTTAAGATGATGAGGAGACTTAGATTACTGCATCTTGAAGATGTACAACTTAGAGGAGACTACCAATACATCAGTAGAGATCTCAGATGGCTTTGCTGGCATGGCTTTCATGTAAAATACATTCCTAGCAACTTTTATCAACAGAAATTAGTTGCTATTGACTTAAAACACAGCAGCCTCATACAACTGTGGAAGGAACCCCGGTTATTGAAGATGGTGAAGATCCTCAATCTAAGCCACTCACCTTGCTTGTCTCAAACTCCTGATTTCTCAAATCTACCAAATCTTGAATCGTTGATCCTCAAAGATTGTCCAAGTTTGTTCATCATACATCATTCTATTGGGCTTCTTCATAAACTTCTTTTACTAGATTTGGAGGATTGTATTGGCCTTCGTAGTCTCCCAAGAAGCATTTATAGATTAAAACGCTTGAAAACTCTCATTCTTTCTGGTTGTAAGAATATTGAAAAGCTTGAGGAGGACATAGAACAAATGGAGTCTTTGACAACTCTAATTGCTCCTGCAATAAAAAAAGTGCCCTATTCTTTAGTGAGATTAAAAAGCATTTTATATCTATCTGTGTGCGGTCATGAAGGATTATCACGTCAAGTGATTCCTTCTCTTTGCCAGTCTTGGATGTCCCCAACAAATAATCCACTACCTCTTATTCCATCCCCTGCGGGCATGCCATCATCAATTTTGTGGGATATGCTAAAGAGTATCAGTGATTCTCAAACAATCCCAAGTAGTGTGCCAAAGCAAAGTCTTTTGTTGGAAGATGGATTGAAGATTTCTGATTCCTGTCTTTTGTTGGAAGATGGATTGGAGATTTCTGATCCTTTGTGTGCCACAAATTGTGTGGACATCTCGAGGCCTAAAATTTGCTTGGAACATCTTCTAATTCAAATTGGAAAGAATTCTCAAGTCCTTTATACACTTTCAAAGAAGATTTCACAGGGATTAAATCTCACAGAGTGTGGTGATGATTGTATTCTTCTTGGTGATAATTACCCCTATTGGCTAACATTTAAAGGTGAAGGAGCTTCTACAACTACTTTGCTCTACACGGAAGACAAACTGAAATCCTTGGAAGAAGTAGAGATGAAAGAGATAATATCAAATCTAGAATGTGATGACCAAGTGGAAGTGAAAGTAGTTTATGGGAATGGATTCACTATGAAGAAAACAATCGTCTACTTGATCTATAATGAGTCCTTTGATGAACAGATGGAGCCTTCAACATCGGAAGCTATAAATTTAACTAGCACCAAACACAAATGTGAGGAGGAGGAGGAGGAGGCACATCAATCTACCAGACCTAGAAAGGCAATGAAGATTTGA 2712 0.3853 MSFQIEVVLPVFYDVDPSEIRHQTSSFGEAFKELIRRISPPEYQVSRWRTTLAEAGGIAGIVVLGSRNESEEVKVVIENVCNVLDKKDLFVADHPVGLDNHVREVITMLQSHQPEDVVMVGIWGMGGVGKTTIAKAIYNEIGRSFESRSYLSKIRKVWDQKEGQVRLQNQLLSDICKTTEMKINSIESGKITLRDRLPHKRALVVLDDVDKLAQLNALVGSHDWFKLGSKIIITTRDRRLLLKRGCDVYIVTNLNEGESIELFSWHAFKQASPKKNFKELSRNIVAYSGGLPLALEVLGSYLFDREAKEWKSVLEKLKKIPDNKIQKKLKISYDGLDDLEKEIFLDICCFFIGMDRNEVTHILNGCEFFADIGIKTLVERSLVTVDENNKLGMHDLLRDMGREIIREQSQKELGKRSRLWFHEDACAVLSEQMGTEAIEGLALKMSQSEKMHFQAEAFKMMRRLRLLHLEDVQLRGDYQYISRDLRWLCWHGFHVKYIPSNFYQQKLVAIDLKHSSLIQLWKEPRLLKMVKILNLSHSPCLSQTPDFSNLPNLESLILKDCPSLFIIHHSIGLLHKLLLLDLEDCIGLRSLPRSIYRLKRLKTLILSGCKNIEKLEEDIEQMESLTTLIAPAIKKVPYSLVRLKSILYLSVCGHEGLSRQVIPSLCQSWMSPTNNPLPLIPSPAGMPSSILWDMLKSISDSQTIPSSVPKQSLLLEDGLKISDSCLLLEDGLEISDPLCATNCVDISRPKICLEHLLIQIGKNSQVLYTLSKKISQGLNLTECGDDCILLGDNYPYWLTFKGEGASTTTLLYTEDKLKSLEEVEMKEIISNLECDDQVEVKVVYGNGFTMKKTIVYLIYNESFDEQMEPSTSEAINLTSTKHKCEEEEEEAHQSTRPRKAMKI 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00039 903 Pfam TIR domain 7 76 IPR000157 GO:0007165
Pral4707g00039 903 SMART AAA_5 116 246 IPR003593 GO:0016887
Pral4707g00039 903 Gene3D Ribonuclease Inhibitor 435 635 IPR032675 -
Pral4707g00039 903 MobiDBLite consensus disorder prediction 880 903 - -
Pral4707g00039 903 PRINTS Disease resistance protein signature 288 302 - -
Pral4707g00039 903 PRINTS Disease resistance protein signature 196 210 - -
Pral4707g00039 903 PRINTS Disease resistance protein signature 596 612 - -
Pral4707g00039 903 PRINTS Disease resistance protein signature 119 134 - -
Pral4707g00039 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 653 IPR044974 GO:0006952
Pral4707g00039 903 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 60 IPR035897 -
Pral4707g00039 903 Gene3D - 83 250 IPR027417 -
Pral4707g00039 903 Gene3D - 253 337 IPR042197 -
Pral4707g00039 903 FunFam Disease resistance protein (TIR-NBS-LRR class) 255 337 - -
Pral4707g00039 903 Pfam NB-ARC domain 99 334 IPR002182 GO:0043531
Pral4707g00039 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 347 IPR027417 -
Pral4707g00039 903 Gene3D - 3 82 IPR035897 -
Pral4707g00039 903 MobiDBLite consensus disorder prediction 880 897 - -
Pral4707g00039 903 SUPERFAMILY L domain-like 393 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00039 Pral-Chr4707 739405 745398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00039 96 642 WRKY Transcription Factor Family AT5G45050 33.795 6.96e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00039 - - pcin:129288023 1078.93