Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00038 ATGTATTTCAGGAATCGAAAGGATATTTCAGGCAATGGATATGAAGTGTTCTTGAGTTTTAGTAGAGGCGAAGAGACTCCAGAATCTTTCCCTTCCCGTCTCTATTCATCTCTGAGGGAAAAGGGATATTCTGTTTTCAAAGAGGATATATCAATTGAACTATTGCAGAGTGTCCGATGTCGTAAAATGTTCTTCATCATCTTATCTGAAGACTATGTTAGTTCTAGAATGTGCCTCGAGGAACTCACAAAAATCATGAAGTTTCGCATGCCATATTATCATGTAGTTTTTCCCATATTCTGTGACGTGGGTCTGTCTAAAGTTTGGAATCAAGAATCTAGTTTCAAAGAAGCATTTCAAGGTCTCATACAAAATGTTTCACCCACTGAAGAGGAAGTTTCACGGTGGGAGAGAGCTCACTCTGAATTTAGACGGTACGTTGCTAGAATTGATGAGTCTGCTCGCTTCAACCTCAAGTCCGCTGGGCTGGATGTTTCTGCTCACCTCAAGTCTGGCTCTCTATATGATAAGGATATTGAGCCTATTGTCGGTCTTGTTGATCATTTATTGAAGCGTTTTGATGATAAGATGTTCCCTGTTGGAGTGGATTCTCGTGCTCAGGATGTGATTACAATGCTTCATAACCTTAAAACAAAAGATGTTGTCTCCATAGGGATATGGGGAATGCCGGGTATAGGCAAAACAACTATTGCCAAAGCTATCTTTAACCACATTCAGTACGAATTCGAGGGCACATGTTTTCTTCCAAATGTCAGGAATGAATGGGTGAGGAAATTCGACCTTGTTTCAGAAATATTTGAAGCAACTGAATCAGGAAGCCTCGACTTGAATGAAAGACCTTGCCGTAAGAAGGTACTTCTTGTGCTTGACAATGTGGATAAGCTGGAGCAACTGAATACTTTATGTGGAAGTCGTGAGCAATTTGGTGAAGGGAGTATAATTATCATTACAACTAGAGATTCACGTCTATTTAATGACTTTAAAGTGGATGACACATATCGCATGAAACTTTTGAGTAAGGAAGAGTCTCTTGAACTTCTCAGTTGGCACGCATTTCAACAAGCATCCCCTAAAGAAGACTTCATCAATGTTTGCGAAGAAGTGGTTGCTTTTGTTGAGGGACTACCACTGGCTCTTGAAGCCATTGTCCATTTTTCACTGTACGGGGAGCAACCGAATGAATGGAAATCCATATTGTGGAAGATGAATAGAGATCTACCTGATGACATAGGCGAGGAACTACGCGATAGCATTGACTACTCCTTGAATGGTGAAGAGAGAGAAATATTTCTTAATATAGTTTTATTTTACATTGGAGAGCCCATGCATGATGTGGTGCGTAAGTTGGATGGCCGTGGATGTAAAGCTCGCATCGGAATAATAGCCCTGATGGATCAAAGCCTTGTAACCATTGACGACGACAACAAACTTAGAATGCATAATCTGTTGCAGCTCATAGGAAGACAAATAATATGTGAAACTCCACGAGACGAGCTTGAAAATTACGATGATGTTGAGCTTCCGGAAGGAAAGCATATAAAAACAGAACTTTTGCAAGCAATTGGAAGTTCAAAAATTGCAATCATCATCTTCTCTGAGGAATATGGTGGATCTAAATGGTGTTTGGAGGAATTGTCAATGATCATGGAGCTTTATGAAACAAATAATAGGACAGTTCTACCTGTGTTTTACCATGTTAGTCCAAAACAAATTCGTCATCAAACTTCCAATTTTGGAGAAGCATTTAACGATCTTGTACAAAAGAAGTCACCATCAAAATATCTAGTTTTGGAGTGGAGGAAAGCCCTTGATGGTGCTGGAAATCTTAAAGGGACGGTTGTACATAGTTCCAGGGACGAGAGTGATTATGTTAAAGATATTGTTGGGCAAGTTTGTGATATATTGGACAAGAAAGACTTATTTGTGGCTGAGCACCCAGTAGGAGTAGATAATCGTGTACGTGAAGTGATTGCAATGCTCCAAAACCATTCATCTGAAGATACTGTCATATTAGGGATATGGGGAATGGGGGGCGCCGGCAAAACAACTATTACCAAAGCCATCTATAATGAAATTGGTCCCAGTTTTGAGAGTAGAAGTTACCTTCCAAATATCAGAAAAGTTTGGCGTCAAAAAAATGGTAAAGAGGACTTACAAAACAAACTTCTTTCTGAAATATGCAAGCCAACAAAAATGAAGATAGACAGCATTGAATCAGGAATGATCACTTTGAAAGATAGACTTAGACATAAAAAGGCGTTGGTTGTGCTTGATAATGTGGATAAGCTGGCCCAACTAAAAGCTTTAGTTGGAAGTGGTGACTGGTTTAAACCAGGAAGTATAATAATCATCACAACTAGAAATCAAAGTTTACTCCCTAAAAAGGATTGTTGTGTTTATATGATGAAGAATTTGGATGACGGGGAATCTTCTGAGCTTTTTAACTGGCATGCATTTAAACAAGAAAGTCCCAAGGATGATTTCATTCACCTTTCAAGAGATATAGTTGCATACTGTGGGGGACTTCCATTGGCTCTTGAGGTCCTAGGCTCTTATTTATTTGGCAAAGAAGTGGAGGAATGGAAGAGCACATTGAGCAAACTTAAAAGAATTCCCGACAGAAAGATACACAAGAAGCTAAAAATAAGCTATGATGGTTTAGATGATTTGGAGAGAGAAATATTCCTCGATATATGTTGCTTCTTTATTGGGATGGACAAAACTGAAATGACACACATATTAAATGGCTGTGGATTTTATGCTGACATTGGAATCAAAAGGCTTTTGGAGCGAAGTCTTGTAACCATTGATGAGAAGAACAAGCTTGTTATGCATGATTTGCTGCGAGACATGGGAAGAGAAATACTTCGTGAACAATCTCAAAAGGAGGTTGGAAAGAAAAGCAGGTTATGGTTTTATAAGGAAGCACGAGCTGTATTATCAGAATCCTCGGTAGGAACTTTTATATCCAATGTTTAA 3000 0.39 MYFRNRKDISGNGYEVFLSFSRGEETPESFPSRLYSSLREKGYSVFKEDISIELLQSVRCRKMFFIILSEDYVSSRMCLEELTKIMKFRMPYYHVVFPIFCDVGLSKVWNQESSFKEAFQGLIQNVSPTEEEVSRWERAHSEFRRYVARIDESARFNLKSAGLDVSAHLKSGSLYDKDIEPIVGLVDHLLKRFDDKMFPVGVDSRAQDVITMLHNLKTKDVVSIGIWGMPGIGKTTIAKAIFNHIQYEFEGTCFLPNVRNEWVRKFDLVSEIFEATESGSLDLNERPCRKKVLLVLDNVDKLEQLNTLCGSREQFGEGSIIIITTRDSRLFNDFKVDDTYRMKLLSKEESLELLSWHAFQQASPKEDFINVCEEVVAFVEGLPLALEAIVHFSLYGEQPNEWKSILWKMNRDLPDDIGEELRDSIDYSLNGEEREIFLNIVLFYIGEPMHDVVRKLDGRGCKARIGIIALMDQSLVTIDDDNKLRMHNLLQLIGRQIICETPRDELENYDDVELPEGKHIKTELLQAIGSSKIAIIIFSEEYGGSKWCLEELSMIMELYETNNRTVLPVFYHVSPKQIRHQTSNFGEAFNDLVQKKSPSKYLVLEWRKALDGAGNLKGTVVHSSRDESDYVKDIVGQVCDILDKKDLFVAEHPVGVDNRVREVIAMLQNHSSEDTVILGIWGMGGAGKTTITKAIYNEIGPSFESRSYLPNIRKVWRQKNGKEDLQNKLLSEICKPTKMKIDSIESGMITLKDRLRHKKALVVLDNVDKLAQLKALVGSGDWFKPGSIIIITTRNQSLLPKKDCCVYMMKNLDDGESSELFNWHAFKQESPKDDFIHLSRDIVAYCGGLPLALEVLGSYLFGKEVEEWKSTLSKLKRIPDRKIHKKLKISYDGLDDLEREIFLDICCFFIGMDKTEMTHILNGCGFYADIGIKRLLERSLVTIDEKNKLVMHDLLRDMGREILREQSQKEVGKKSRLWFYKEARAVLSESSVGTFISNV 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00038 999 Gene3D - 190 339 IPR027417 -
Pral4707g00038 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 439 IPR027417 -
Pral4707g00038 999 Gene3D - 811 895 IPR042197 -
Pral4707g00038 999 Gene3D - 344 429 IPR042197 -
Pral4707g00038 999 SMART till_3 13 150 IPR000157 GO:0007165
Pral4707g00038 999 SMART till_3 478 616 IPR000157 GO:0007165
Pral4707g00038 999 Pfam TIR domain 14 148 IPR000157 GO:0007165
Pral4707g00038 999 Pfam TIR domain 510 638 IPR000157 GO:0007165
Pral4707g00038 999 SUPERFAMILY "Winged helix" DNA-binding domain 882 987 IPR036390 -
Pral4707g00038 999 Gene3D - 649 807 IPR027417 -
Pral4707g00038 999 SMART AAA_5 674 803 IPR003593 GO:0016887
Pral4707g00038 999 SMART AAA_5 220 346 IPR003593 GO:0016887
Pral4707g00038 999 FunFam Disease resistance protein (TIR-NBS-LRR class) 813 895 - -
Pral4707g00038 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 647 905 IPR027417 -
Pral4707g00038 999 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 139 IPR035897 -
Pral4707g00038 999 ProSiteProfiles TIR domain profile. 470 642 IPR000157 GO:0007165
Pral4707g00038 999 ProSiteProfiles TIR domain profile. 12 127 IPR000157 GO:0007165
Pral4707g00038 999 Pfam NB-ARC domain 658 888 IPR002182 GO:0043531
Pral4707g00038 999 Pfam NB-ARC domain 208 413 IPR002182 GO:0043531
Pral4707g00038 999 Gene3D - 496 648 IPR035897 -
Pral4707g00038 999 Gene3D - 10 155 IPR035897 -
Pral4707g00038 999 PRINTS Disease resistance protein signature 754 768 - -
Pral4707g00038 999 PRINTS Disease resistance protein signature 846 860 - -
Pral4707g00038 999 PRINTS Disease resistance protein signature 677 692 - -
Pral4707g00038 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 511 986 IPR044974 GO:0006952
Pral4707g00038 999 SUPERFAMILY Toll/Interleukin receptor TIR domain 509 618 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00038 Pral-Chr4707 704706 715699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00038 654 978 WRKY Transcription Factor Family AT5G45050 34.535 1.02e-50 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00038 - - pcin:129287786 971.844