Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00027 ATGGCTGCCAAGAAGTGCTCTCTGCTGAAGGAAGTCAATGACTCAACTGACAGATGGAGAATTACAGTTCGTGTGATCAGGAGGTGGAATGTCTACAAGAAGGAGTCTCCTACTGAGGTTTTTTGCGTGTCCATGCTACTGATAGATGAAGAGGGGACAAGAATCCAAGCTTCTATCATGAACAAAAACCTATTTGATCGTTTTAGTGCCATGGCAGTGGAAGGGATAACTTATTTTATGGCTAATTTCATCGTCTCTCCAAATAATAAGGAGTACAGGGCAACAAACCATGCTTTCAAACTGACACTAGGTACTTACACATATGTGAAGGAAGTACTTGCCCAAATACCTGAATACTCTTATCATTTCTTCCCTATTCGTCACATAATTAAGATGAAGGAGAGCAACCATGTTGACTATCTTATTGATGTCATTGGATTCGTTGCATCAATTGGGCATCTAGAGGAGTACAAGTCTAACAATGAGATAAAGAACAAATTGCGATTGTTGCTGGTAGATGAGCTTGGCAATACTGTGGGTTGCGTTCTTTATGATGACTGTGCAACCAATGTCTGCATGATGGATATTAGCACCATGCAATCTCCTGTTGTGATGATTATGCAGCTTGGAAGGATTGGATTTGATGATGATGGTATGGTTGAGATTTGTAGCTCATACCATGCCACCCAGATTTCATGCAGTCCAAAGTTTCCAGAAGTCAAGCATTTTATCGATAGGTATAGTGCATTGAGCAGTGCTACCACATTACCCTCTCCTACTATCAGCACAATCTCTCATACTGCTACTACACAATCAAATGATCAGTCTGCAACTAGCCTGCTTCGTAACCATCCTTTGATTTTTGTTGCAGACATATGCAATCAGCCAGCTGATTCGTTCTTCCTCATAAAGTGCTTAGTAGTCAAAGTTGACACGAGGCATGGCTGGTGCTATGAAGGTTGCTCCAGGTTAAGGGTCCACTACACGGTTGAGGATTCATCTGGCAAGGCAACTGTAGTCTTCTTTGACAAACTTGCTTCTAATTTCTTCCAAAAGACTGCACTTGAGATGAATCACACTCTTATTAAGGAGGAACGTGAATATGATTTTCCTGATGAGCTAGACCTAATGGTTGGAAAGACGGTGCTCTTGAAACTTAAGCTGAACAAGTATAACGTTGACTTCCCAAATTCTGGCATATCTGTTGCATCATTCACACACTTACAGTTTTTTTGGAAAAAAATGTTCCTGCCATGTACAGTATTGAATGAAGTTACTAATGTTGCCATCGACGAGAATGATGAAGACAGCCCCGGCATTGAGGAGATACCTCTGTCTAGGATAGCTGGCCCCTCAACTTACAGGCCAAAGAGGAAGGTAGCTGGGAAGAGGATCATTGGAGTTAAGGAGAAATGGGTTCGTTCACCCAATGCCTCACCTATCAAGACATCGTCCAAGCCTTTAAAGAGCATCAAGCAAGAGAAGAACTGA 1491 0.4192 MAAKKCSLLKEVNDSTDRWRITVRVIRRWNVYKKESPTEVFCVSMLLIDEEGTRIQASIMNKNLFDRFSAMAVEGITYFMANFIVSPNNKEYRATNHAFKLTLGTYTYVKEVLAQIPEYSYHFFPIRHIIKMKESNHVDYLIDVIGFVASIGHLEEYKSNNEIKNKLRLLLVDELGNTVGCVLYDDCATNVCMMDISTMQSPVVMIMQLGRIGFDDDGMVEICSSYHATQISCSPKFPEVKHFIDRYSALSSATTLPSPTISTISHTATTQSNDQSATSLLRNHPLIFVADICNQPADSFFLIKCLVVKVDTRHGWCYEGCSRLRVHYTVEDSSGKATVVFFDKLASNFFQKTALEMNHTLIKEEREYDFPDELDLMVGKTVLLKLKLNKYNVDFPNSGISVASFTHLQFFWKKMFLPCTVLNEVTNVAIDENDEDSPGIEEIPLSRIAGPSTYRPKRKVAGKRIIGVKEKWVRSPNASPIKTSSKPLKSIKQEKN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00027 496 Gene3D - 322 414 IPR012340 -
Pral4707g00027 496 SUPERFAMILY Nucleic acid-binding proteins 287 392 IPR012340 -
Pral4707g00027 496 SUPERFAMILY Nucleic acid-binding proteins 121 249 IPR012340 -
Pral4707g00027 496 Gene3D - 114 256 IPR012340 -
Pral4707g00027 496 SUPERFAMILY Nucleic acid-binding proteins 9 112 IPR012340 -
Pral4707g00027 496 Gene3D - 4 111 IPR012340 -
Pral4707g00027 496 CDD RPA1_DBD_A_like 20 101 - -
Pral4707g00027 496 MobiDBLite consensus disorder prediction 476 496 - -
Pral4707g00027 496 Pfam Domain of unknown function DUF223 45 131 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00027 Pral-Chr4707 559501 562044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00027 9 369 Core DNA Replication Machinery Family AT5G61000 27.363 2.65e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00027 - - pcin:129290097 350.517