Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00026 ATGGGAGCCAGTCAAATGAAGGAGGCACTGTCCAATAAAAGTGTGCTGGTAGTGTTTGATGATGTGAATCATATAGACCAACTCATAGCATTATGTGGAAGTAGGGATCTGTGCTTCGGCAAAAGGAGTTTAGTACTTGTTACGTCAACAAGTAAGGATCTAATTCTTGGCCTCGGACTCTACTTTTATGAAATGAAGGCGCTGGATGAGAGTGAGTCTCTTGAGCTTTTCAGCTGGCATGCATTTAAGAAATCTAGTCCAACAGATGATTTCATGTCTCTATCAGGGAAAGCAATAAATTTTTGTGAAGGACTATCGTTAGCTCTTGAAGTTATTGGCTCTCTTTTGCTTAATAGGACAAAAAAAGAGTGGAATAATGTGTTGAAGAAATTGAGAGGAATTCCTCGTGGTCAAATACAAGAGAAGCTCAAGATAAGCTTGAATTTTTTAACCGATTCAGAGAAAGATTTATTCTATAATATAGCTTCCTTTTATGTGGGTCTAAATAAACATGATGTTACACAATTGTTAAAGGGCTCAAAATTTCCTGTAGAAAAGGCAATGCATGAGATTACAGAGCAGGGACTTGTAAAAGTTGATATGAGTGATAAGCTTGATGTTCATCATTTGTTGCGAGAGATAGGAAGAGAAATAAGTCCTAAAAAGATAAAGCATGAATATACCTATGATGTATTCCTGAGTTTTAGAGGTGAAGATACACGTAAATCTTTTACTACTCATCTTTGCACTGCTTTAAAGAAAGCAGCTATTGAGGTCTTCATGGATGAAGAGGGGATTAGAAGGGGTGAAGCCATTTCTTCCTCTTTACTGCAAGCAATTGAAAGTTCAAGAATGTCGATAATTATATTCTCGAAAAATTATGCTGGTTCTTTTCACCAAAAAATTATGCTGGTTCTAGTTGGTGTTTACAACAATTAG 939 0.3642 MGASQMKEALSNKSVLVVFDDVNHIDQLIALCGSRDLCFGKRSLVLVTSTSKDLILGLGLYFYEMKALDESESLELFSWHAFKKSSPTDDFMSLSGKAINFCEGLSLALEVIGSLLLNRTKKEWNNVLKKLRGIPRGQIQEKLKISLNFLTDSEKDLFYNIASFYVGLNKHDVTQLLKGSKFPVEKAMHEITEQGLVKVDMSDKLDVHHLLREIGREISPKKIKHEYTYDVFLSFRGEDTRKSFTTHLCTALKKAAIEVFMDEEGIRRGEAISSSLLQAIESSRMSIIIFSKNYAGSFHQKIMLVLVGVYNN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00026 312 Gene3D - 1 58 IPR027417 -
Pral4707g00026 312 Pfam NB-ARC domain 4 142 IPR002182 GO:0043531
Pral4707g00026 312 SUPERFAMILY Toll/Interleukin receptor TIR domain 220 303 IPR035897 -
Pral4707g00026 312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 160 IPR027417 -
Pral4707g00026 312 Pfam TIR domain 229 297 IPR000157 GO:0007165
Pral4707g00026 312 PRINTS Disease resistance protein signature 9 23 - -
Pral4707g00026 312 PRINTS Disease resistance protein signature 102 116 - -
Pral4707g00026 312 ProSiteProfiles TIR domain profile. 227 312 IPR000157 GO:0007165
Pral4707g00026 312 Gene3D - 67 150 IPR042197 -
Pral4707g00026 312 Gene3D - 222 302 IPR035897 -
Pral4707g00026 312 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 229 297 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00026 Pral-Chr4707 527426 528364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00026 4 218 WRKY Transcription Factor Family AT5G45050 32.258 4.05e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00026 - - pcin:129288830 362.459