Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00022 ATGTCTTCCTTGGCTTCTTCGTCCTCCAAACCCAAATTGACTACCCATTACGACGTCTTCGCAATTTCCCAAGTGACCACACATCGCCTCCCAGACTTTCGGTTTCTGGTAGGATCTCTAAGAGATGATGCCATCAAACTTTTTGCAGACTGTATAAATCCTTCAACGATGGCTACGTCTTTGTCTTCCGCGCTGGAGGCTATGGAAAGGTCGACAATTCTTATGGTTATTTTCACGCCGGAGTTTCTCAGTACCTCCGACAAGTTATTTATTGAGAGGCTGCAGAAAGTAATGGAGTATCACAAATCTGCGAACAGACCAGTGGTTCCTGTATTCTGGGGAGCGAAACGAAAGCAAGTGGTTGAGCATTTGGCAACGCAGTATAAGGATTTGGACTGGATTGGAATCGCCGTCGAAGCTGCTTCGCAATCCGGCGTCACACTGTCCACTGATCTCAGGCAAGAAATGGGTAAACTTAAGGGGGAATTAGACAAATACTTGTTTTGCAATCTTCCGCCCCATCCAGTGGGGTTACTCCGTCGTGTGAAAGATGTACTTCGTCTGTTGATGGGTGGGACTTACTCCATCGGAGTATGGGGAGTTGCAGGTATTGGTAAATCCACTTTCGCCAGAGCTATTTATGATAGAATGGGTGGCAGGTTTGAGAGAAAAAGTTTCCTTGCAAATATCAATGATGAATGGAAGAAAGATAATAGTCTAGTTCATCTACGACAGCAACTTATTTCAGATGTTTTTGAAACAGAACTTGATATGGTTCATGGTGTTAAGATAGGAACTCATCAAATGAAGAAGGCACTCTGCTACAGGAGTGCAGTGGTAGTATTTGATGATGTGAATCATATAGACCAAGTCATAGCATTATGTGGAAGTAGTGATCTGTGCTTTGGCGAACGGAGTTTGGTACTTGTTACATCAATGAATAAGAATCTTCTTTTTGGTCTCAGACTGTACCTTTATGAAATGAAGACGCTGGATGAGAGTGAGTCTCTTGAGCTTTTCAGCTGGCATGCATTTAAGGAATTTTCTCCAAAAAATGATTTCATGTCTCTATCAAGGAGAGGAATATGTTTTTGTAAAGGACTACCACTGGCTCTTGAAGTTATTGGCTCTCTTTTGTATAATAGGACCAAAAAAGAGTGGAATAATGTGCTGAAGAAATTGAGAGGAATTCCTCATGACCAAATACAGGAGAAACTCAAGATAAGTTTTAACTTTTTAACAGATTCAGAAAAAGAATTGTTCTTTAATATAGCTTCCTTTTATGTGGGTCTAAATAAAGACGATGTTTCACAATTGTTAAAGGGCTCAAGATTTCCTGTGGAAAAGGCAATGCATGAGATTATACAGCGGGGACTTGTAAAAGTTGATGGGAGCGACAGGCTTCTTGTTCATCATTTGCTGCGAGAGATAGGAAGAGAAATAAGTCATAAAAAGATAAAGCATGAGTATACCTATGAAGTATTCTTGAGTTTTAGAGGTGAAGATACACGTAAATCTTTTGCTACTCATCTTTACACCGCTCTAAAGAAAGCAGGTATTGAGGTCTTCATCGATGAAGAGGGGATTGGAAGGGGTGAAGCCATTTCTTCCTCTTTACTGCAAGCAATTGAAAGTTCTAGAATGTCGATAATTATATTCTCAAAAAATTATGCTGGCTCTAGTTGGTGCTTACAAGAATTAGAGAAAATCATGGAGTGTCGCAAAACAACTCATCAAGAGGTCTTACCAATATTTTACGATGTGCAACCGTCTGATGTTCGTAAACAACGAAATACCTTTGGAGAAGCATGGAAAAGGCTCACACTAAGAAACTCAACTAGCAAAGTGAAGAAATCGATGATCAGTTGGAAGAGAGCACTCATTGAAGCTGCGAATATATCTGGGTGGGACATGCATGAATGGAGAACTGAAACGGAGTTGATTGACAATGTGGTTGACACTATTACAATGAAGCTAGACAACAAAGACGATTTGTTTGTTGCTCACCACCCAGTGGGAGTAGAGCCTCGTGTGCAAGATATCATCAAGTTGCTGATTAATAAATCAAATGAGGTTATCATAGTAGGGATATGGGGGATGGGGGGGATTGGTAAGACTACTATTGCTAAAGCCATCTTCAATGAAATTGGTCAAACTTTTGAAGGAAAGAGTTTCCTCTCAAATGTGAGGGAAGTGTGGAAGCAAGATAATGGTCAAATTTATCTGCAAAATCAAATTCTTTCAAGCATCTTTAATGCGAGAAGAGTGCAGCTTACAAGTATAGAAATGGGGACAATTCTAATCAAGAAAATGCTTTATAAGAAAAGGGTGCTTCTTGTTCTTGATGATGTAAATGATGAAGATCAGTTGAAAGCTTTATGTGGAAGTCACGAATGGTTTGGTCAAGGTAGTAGAGTAATCATCACTACTAGAGATGAACGGCTACTCAAAATCCTTGGAGTTGGAGAACATAAAATATACAACATGAAAGAAATGAATGACAATGAATCTCTTGAGCTTTTTAGTTGGCATGCGTTTAAGCAACCATTTCCTGAAAGAGATTTTGTTGAATTTTCAAGAAGGATAGTTTCTTACTCAGGAGGTCTGCCACTAGCTCTGGAAGTTCTTGGCTCCTATTTGTTTGATAGGGAAGCATCAATATGGAGAAGTGACAAAAGCTATGCTACACAAATATTAAATGGTTGTGGACTTCATGCTGATATTGGAATTATTCGTCTGGTAGAGAGGAGCCTTGTAAAAGTTGGTAAGAGAAATAAGCTTGATATGCATGACTTGCTATGTAACATGGGAAGACACATCATTCGTGAGAAATCACCGAAGGATCCTAAGAAGTGGAGCAGATTATGGTTTCATGACGATGTGCTAGATGTATTAACAAATTGCTCAGGAACAGACGCGATTACGGGATTGGCTTTAAACATGTCAACAAACAACTCAATGGCGTTGAGTGCCAAAGCATTTGAGAACATAAAGAATCTTCATTTGCTCCAACTTGATCATGTAAAACTTGATGGAGACTTTGGTTATCTATCAAAAGAATTAAGATGGCTTTGTTGGCGTGGATTTCCTTCAGAAAACTTGCCAACAAATTTGCGTCTAGAAAAGATTGTTGCCATAGACTTAAAGTGGAGTAATCTCACAACAGTATGGGAGAAAAGCCAGATGTTAGAGTGGTTGAAACTTCTCAATTTGAGTCATTGTCATTATTTGACAAAGACACCTGACTTTTCAAAGTTACCATATCTTGAAGAGTTGGGATGGAGTGACCAAGGGTTTGACTATTCTCAGCTTCCTCAAGATAATTATTCTGATTGGCTATGTTTTGAGAGTGAAGGATCTTCTGCATCATTTAAAATGCCTCGAGTTGTTGGTCGTAGTTTAAGAGGAATGATAATCTATATTATCTATTCATCTTCTCAAGATAGCATGGTGGCATCCGCATATCCTGTTGGCTTCATGATAAAGAATTTTACAAAGGGTACTATGGACTTTTACAAGAGAGATGATGCAACGACTTCTGCTGATGATAATTGGCACAAAATAATACTTATTCTAGAGCCTGATAATGAGATAGAAATTATGGTCAATTTTGCCCAAAAGCATATTGTGAAGAAGACTTTAATCTATCTGGTGTACGATGAAGGAACTACAATAGGTATCACTCCATAA 3690 0.3902 MSSLASSSSKPKLTTHYDVFAISQVTTHRLPDFRFLVGSLRDDAIKLFADCINPSTMATSLSSALEAMERSTILMVIFTPEFLSTSDKLFIERLQKVMEYHKSANRPVVPVFWGAKRKQVVEHLATQYKDLDWIGIAVEAASQSGVTLSTDLRQEMGKLKGELDKYLFCNLPPHPVGLLRRVKDVLRLLMGGTYSIGVWGVAGIGKSTFARAIYDRMGGRFERKSFLANINDEWKKDNSLVHLRQQLISDVFETELDMVHGVKIGTHQMKKALCYRSAVVVFDDVNHIDQVIALCGSSDLCFGERSLVLVTSMNKNLLFGLRLYLYEMKTLDESESLELFSWHAFKEFSPKNDFMSLSRRGICFCKGLPLALEVIGSLLYNRTKKEWNNVLKKLRGIPHDQIQEKLKISFNFLTDSEKELFFNIASFYVGLNKDDVSQLLKGSRFPVEKAMHEIIQRGLVKVDGSDRLLVHHLLREIGREISHKKIKHEYTYEVFLSFRGEDTRKSFATHLYTALKKAGIEVFIDEEGIGRGEAISSSLLQAIESSRMSIIIFSKNYAGSSWCLQELEKIMECRKTTHQEVLPIFYDVQPSDVRKQRNTFGEAWKRLTLRNSTSKVKKSMISWKRALIEAANISGWDMHEWRTETELIDNVVDTITMKLDNKDDLFVAHHPVGVEPRVQDIIKLLINKSNEVIIVGIWGMGGIGKTTIAKAIFNEIGQTFEGKSFLSNVREVWKQDNGQIYLQNQILSSIFNARRVQLTSIEMGTILIKKMLYKKRVLLVLDDVNDEDQLKALCGSHEWFGQGSRVIITTRDERLLKILGVGEHKIYNMKEMNDNESLELFSWHAFKQPFPERDFVEFSRRIVSYSGGLPLALEVLGSYLFDREASIWRSDKSYATQILNGCGLHADIGIIRLVERSLVKVGKRNKLDMHDLLCNMGRHIIREKSPKDPKKWSRLWFHDDVLDVLTNCSGTDAITGLALNMSTNNSMALSAKAFENIKNLHLLQLDHVKLDGDFGYLSKELRWLCWRGFPSENLPTNLRLEKIVAIDLKWSNLTTVWEKSQMLEWLKLLNLSHCHYLTKTPDFSKLPYLEELGWSDQGFDYSQLPQDNYSDWLCFESEGSSASFKMPRVVGRSLRGMIIYIIYSSSQDSMVASAYPVGFMIKNFTKGTMDFYKRDDATTSADDNWHKIILILEPDNEIEIMVNFAQKHIVKKTLIYLVYDEGTTIGITP 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00022 1229 Gene3D Ribonuclease Inhibitor 937 1112 IPR032675 -
Pral4707g00022 1229 SUPERFAMILY Toll/Interleukin receptor TIR domain 486 636 IPR035897 -
Pral4707g00022 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 422 IPR027417 -
Pral4707g00022 1229 PRINTS Disease resistance protein signature 771 785 - -
Pral4707g00022 1229 PRINTS Disease resistance protein signature 694 709 - -
Pral4707g00022 1229 PRINTS Disease resistance protein signature 1061 1077 - -
Pral4707g00022 1229 PRINTS Disease resistance protein signature 866 880 - -
Pral4707g00022 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 666 899 IPR027417 -
Pral4707g00022 1229 Pfam NB-ARC domain 191 397 IPR002182 GO:0043531
Pral4707g00022 1229 Pfam NB-ARC domain 677 883 IPR002182 GO:0043531
Pral4707g00022 1229 Gene3D - 12 158 IPR035897 -
Pral4707g00022 1229 SMART till_3 491 633 IPR000157 GO:0007165
Pral4707g00022 1229 Gene3D - 164 322 IPR027417 -
Pral4707g00022 1229 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 492 1093 IPR044974 GO:0006952
Pral4707g00022 1229 Pfam TIR domain 492 661 IPR000157 GO:0007165
Pral4707g00022 1229 CDD ABC_ATPase 680 820 - -
Pral4707g00022 1229 SUPERFAMILY L domain-like 944 1096 - -
Pral4707g00022 1229 Gene3D - 663 821 IPR027417 -
Pral4707g00022 1229 ProSiteProfiles TIR domain profile. 490 659 IPR000157 GO:0007165
Pral4707g00022 1229 FunFam Disease resistance protein (TIR-NBS-LRR class) 488 661 - -
Pral4707g00022 1229 Gene3D - 486 662 IPR035897 -
Pral4707g00022 1229 Gene3D - 831 899 IPR042197 -
Pral4707g00022 1229 Gene3D - 330 414 IPR042197 -
Pral4707g00022 1229 SMART AAA_5 691 833 IPR003593 GO:0016887
Pral4707g00022 1229 SMART AAA_5 192 329 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00022 Pral-Chr4707 422441 432210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00022 65 481 WRKY Transcription Factor Family AT4G12020 23.776 1.02e-26 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00022 - - pcin:129288830 1202.58