Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00019 ATGTCTACAGTGTTTGCGAGGACACTTGGTTATTGCCGGAAGAGGACAACACAAGATTATTTCTTTGATGCTCCTGCCGAGGAGCATCCTAAAATTCAACTTAGTCAGCTTAGAAAGTTTTCCCTGCGTGAGCTACAAGATGCAACGGACAACTTTAGTAACGAAAACATTGTGGGTAAAGGTAGATCTGGTAAGGTCTACAAAGGACGATTGGCTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGTGGAAGGCGCTCAGTTGGGAGAGCTGCAATTTCAAACAGAAGTACAAATTATGAGCTTGGCAGTCCACCGTAATTTGCTGCGGCTGCTTGGTTATTGCAAGACCCCAACTGAACGGTTGCTTGTATATCCGTTCATGGCTAAAGGCAGTGTGGCATCACGGTTACGAGGCCCCCCGGAATCATGGCCTGTACGGAAGCGAATCATACTGGGAGTTGCAAGGGGGCTTGCTTATTTGCATAATCATTGTGATCCAAACATCATCCACCGTGATGTGAAAGCTGTCAATATATTACGGGATGAGGATTTTGAAGCAGTTATTGGGGACTTTGGCTTTGCAAAACCCATGGACTACGAAGATACAGCTGTGCTTGGTTCGATTGGGCACATTGCACCAGGATACCTCTCCACCGGAATGTCTTCGGAGAAGTCTGATGTTTTTGGTTACTGTTTGATGCTTCTTGAACTAATGACTGGACAGAGGGCTTTAGTTCGCGCACGACTTGGCAATGATGATGATGTCATGTTAATTGATTGGATGATAGGGCTTTGGAAAGACAAGAAATGGGAAACACTAATGGATGCCGATTTGATCGGTGACTATAATAAAGAGGAGGAGGAGCATTTAATCAAGGTGGCCTTGCTATGCACACAAAGCTCGGTCATGGGAAGACCAAAGATGTCTGAGGTGCCAAGGATGCTTGAAGGTGATGGGCTTGATGAAAAATGGGATGAATGGCAGAAAGACGAGACGTGTCCATTAGGTAATGGAACCCTTCTCTCCTGTTCCCCCGTGACCTCTTCTAGTTGGCAGATTCTAGACCCAGATTCAGATATCCTCCCAGAAGAACTGTCAGGTCCCAGATGA 1116 0.4588 MSTVFARTLGYCRKRTTQDYFFDAPAEEHPKIQLSQLRKFSLRELQDATDNFSNENIVGKGRSGKVYKGRLADGSLVAVKRLKVEGAQLGELQFQTEVQIMSLAVHRNLLRLLGYCKTPTERLLVYPFMAKGSVASRLRGPPESWPVRKRIILGVARGLAYLHNHCDPNIIHRDVKAVNILRDEDFEAVIGDFGFAKPMDYEDTAVLGSIGHIAPGYLSTGMSSEKSDVFGYCLMLLELMTGQRALVRARLGNDDDVMLIDWMIGLWKDKKWETLMDADLIGDYNKEEEEHLIKVALLCTQSSVMGRPKMSEVPRMLEGDGLDEKWDEWQKDETCPLGNGTLLSCSPVTSSSWQILDPDSDILPEELSGPR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00019 371 Gene3D Transferase(Phosphotransferase) domain 1 129 336 - -
Pral4707g00019 371 FunFam Somatic embryogenesis receptor kinase 1 21 128 - -
Pral4707g00019 371 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 34 327 - -
Pral4707g00019 371 Pfam Protein kinase domain 53 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4707g00019 371 FunFam Somatic embryogenesis receptor-like kinase 1 129 336 - -
Pral4707g00019 371 SMART serkin_6 52 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4707g00019 371 ProSiteProfiles Protein kinase domain profile. 52 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4707g00019 371 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Pral4707g00019 371 Gene3D Phosphorylase Kinase; domain 1 21 128 - -
Pral4707g00019 371 SUPERFAMILY Protein kinase-like (PK-like) 30 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00019 Pral-Chr4707 345358 346939 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00019 1 371 Receptor kinase-like Gene Family AT4G33430 66.053 2.12e-166 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral4707g00019 Pkinase 2.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00019 K13416 - sind:105172594 489.189