Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00017 ATGGGCAATAGTGCTGCTGGTGGAGCTATTACTGGACTAATGTCTACAGTCTTTGGGAGGACACTTGGTTATTGCCGGAAGAGGACAACACAAGATTATTTCTTTGATGTTCCTGCCGAGGAGCATCCTAAAATTCACCATAGTCAGCTTAGAAAGTTTTCCCTGCGTGAGCTGCAAGATGCAACGGACAATTTTAGTGACAAAAACATTGTGGGTAAAGGTGGATCTGGCAAGGTTTACGCAGGACGATTGGCTGATGGGTCTCTAGTTGCAGTTAAAAGACTTAAAGTGGAAGGCGCTCAGTTTGGAGATCTGCAATTTCAAACAGAGGTACAAATTATGAGCTTGGCAGTCCACCGTAATTTGCTGCGGCTGCTTAGTTATTGCATGACCCCAACTGAACGGTTGCTCGTACATCCTTGCATGGCTAACAGCAGTCTGGCATCTTGGTTAGGGGCCCGCCATCGCCAAGTGTTGCTTGGATGGGCTCTACGGAAGCGAATCGTACGGGAAGTTGCAAGGGGGCTTACTTATTTGCATAATCAATGTGATCCAAAGATCATTCACCGTGATGTCAAACCTGCCAGTATATTATTGCATGAGGATTTTGAAGCAGTTATTGGGGACTTTGGCGTTGCAAAACCCATGGACTACGAAGATATAGCTGTGCTTGGTTCGATTTGGCGCATTGCACCAGAATATCTCTCCGCCGGATTGTCTTAGGAGAAGTCTGATGTCAGTTACGGTGTGATGCTTCTTGAACTAATAACCAGACAGAAGGCTTTCGATCCGGCCCGACTAGTGAATGGTGGTCACGTCATGTTAATTGATTGGGTGATAGGGCTTTTGAAAGACAAGAAATGGGAAACACTAATGGATGCTGATTTGGGCGATGAATATAATAAAGATGAGGCAGAGCATTTCATCAAAGTGGCCTTGCTATGCACACAAAACTCGTTTATGGGAAGACCAAAGATGTCCGAGGTGCTAAGGATGCTTGAAGATGATGGGCCTGATGAAAAATGGGATGAATGGCAGAAAGACGAGACGTGTCCATTAGGTAATGGAACCCTGCTTTGGCCTCCAGGAGGACCGTCAGGTCCCAGATGA 1110 0.4613 MGNSAAGGAITGLMSTVFGRTLGYCRKRTTQDYFFDVPAEEHPKIHHSQLRKFSLRELQDATDNFSDKNIVGKGGSGKVYAGRLADGSLVAVKRLKVEGAQFGDLQFQTEVQIMSLAVHRNLLRLLSYCMTPTERLLVHPCMANSSLASWLGARHRQVLLGWALRKRIVREVARGLTYLHNQCDPKIIHRDVKPASILLHEDFEAVIGDFGVAKPMDYEDIAVLGSIWRIAPEYLSAGLSXEKSDVXSYGVMLLELITRQKAFDPARLVNGGHVMLIDWVIGLLKDKKWETLMDADLGDEYNKDEAEHFIKVALLCTQNSFMGRPKMSEVLRMLEDDGPDEKWDEWQKDETCPLGNGTLLWPPGGPSGPR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00017 370 Gene3D Phosphorylase Kinase; domain 1 34 140 - -
Pral4707g00017 370 ProSitePatterns Protein kinases ATP-binding region signature. 71 93 IPR017441 GO:0005524
Pral4707g00017 370 MobiDBLite consensus disorder prediction 339 370 - -
Pral4707g00017 370 FunFam Somatic embryogenesis receptor kinase 1 34 141 - -
Pral4707g00017 370 ProSiteProfiles Protein kinase domain profile. 65 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4707g00017 370 SUPERFAMILY Protein kinase-like (PK-like) 43 335 IPR011009 -
Pral4707g00017 370 FunFam Somatic embryogenesis receptor-like kinase 1 142 353 - -
Pral4707g00017 370 Gene3D Transferase(Phosphotransferase) domain 1 142 353 - -
Pral4707g00017 370 Pfam Protein kinase domain 66 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4707g00017 370 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 47 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00017 Pral-Chr4707 322849 324460 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00017 13 350 Receptor kinase-like Gene Family AT4G33430 64.431 5.10e-147 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral4707g00017 Pkinase 2.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00017 K13416 - gmx:100800522 440.654