Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00015 ATGAGTACACTTAAGGGGGCATTATATAGATACTTGTTTTGCAATCTTCCGCCCCATCCAGTGGGGTTACTACTCCGTAGTGTGAAAGATGTACTTCGTCTGTTGATGGATGGGACTTATTCCATCGGAATATGGGGGGTTCCAAGTATTGGTAAAACTACTTTTGCCAGAGCTATTTACGATAGAATTTGTGGCAGGTTTGAGAGAAAAAGTTTCCTTGCAAATATCAATGATGAATGGAAAAAAGATAACGGTCTAGTTCATCTACGACAGCAACTTATTTCAGATGTTTTCGATACAGAACTTGATATGGTTCATGATGTTAAGATGGGAGCTAGTCAAATGAAGGAGGCACTGTCCAATAAAAGTGTACTGGTAGTGTTTGATGATGTGAATCATATAGACCAACTCATAGCATTATGTGGGAGTAGGGATCTGTGCTTTGGCAAAAGGAGTTTAGTACTTGTTACGTCAACAAGTAAGGATCTAATTCTTGGCCTCGGACTCTACTTTTATGAAATGAAGGCGCTGGATGAGAGTGAGTCTCTTGAGCTTTTCAGCTGGCATGCATTTAAGAAATCTAGTCCAACAGATGATTTCATGTCTCTGTCAGGGAAAGCAATAAATTTTTGTGAAGGACTACCATTAGCTCTTGAAGTTATTGGCTCTCTTTTGCTTAATAGGACAAAAAAAGAGTGGAATAATGTGTTGAAGAAATTGAGAGGAATTCCTCGTGGTCAAATAAAAGAGAAGCTCAAGATAAGCTTGAATTTTTTAACCGATTCAGAGAAAGATTTATTCTATAATATAGCTTCCTTTTATGTGGGTCTAAATAAACATGATGTTACACAATTGTTAAAGGGCTCAAAATCTCCTGTAGAAAAGGCAATGCATGAGATTATAGAGCGGGGACTTGTAAAAGTTGATATGAGTGATAAGCTTGATGTTCATCATTTGTTGCGAGAGATAGGAAGAGAAATCAGTCCTAAAAAGATAAAGCATGAATATATCTATGATGTATTCTTGAGTTTTAGAGGTGAAGATACACGTAAATCTTTTACTACTCATCTTTGCACTGCTTTAAAGAAAGCAGGTATTGAGGTCTTCATGGATGAAGAGGGGATTGGAAGGGGTGAAGCCATTTCTTCCTCTTTACTGCAAGCAATTGAAAGTTCAAGAATGTCGATAATTATATTCTCAAAAAATTATGCTGGTTCTAGTTGGTGTTTACAAGAATTAGAGAAAATCATGGAGTGTCACAAAACAACTCATCAAGAGGTCTTACCAATATTTTATGATGTGCAACCATCTGAAGTTCGTAAACTACAAAATATTTTTGGAGAAGCATGGAAAAGACTCACACTAAGAAACTCAACTAGCAAAGTGAAGAAATCGATGATCAATTGGAAGAGAGCACTCATTGAAGCTGCGAATATATCTGGGTGGGACATGCATGAATGTAGAACTGAAACGGAGTTGATTGACGATGTGGTTGAAACTATAACAATGAAGCTAGACAGCAAAGACTTGTTTGTTGCTCACCATCCAGTGGGAGTGGAGCCTCGTGTGCAAGATATCATCAAGTTGCTGATTAATAAATCAAATGAGGTTATCATAGCAGGGATATGGGGGATGGGCGGGATTGGCAAGACTACTATTGCTAAAGCGATCTTCAATGAAATTGGTCAAACATTTGAAGGAAAGTGTTTCCTCTCAAATGTGAGGGAAGTGTGGAAGCAAGATAATGGTCAAGTTTATCTTCAAAAACAAATTCTTTCAAGCATCTTTAATGCAAGAAGAGTGAAGCTCACAAGTATAGAAATGGGGACAACTCTAATCAAGCAAATGCTTTGTAAGAAAAGAGTACTTATTGTTCTTGATGATGTAAATAATGATGATCAGTTGAAAGCTTTATGTGGAAATCATGAATGGTTTGGTAGAGGTAGTAGAATACTCATCACTACTAGAGATGAACGGCTACTCAAGATCCTTGGAGTGGAAGATCATAAGATATACAACATGAAAGAAATGAATGATAGTGAATCTCTTGAGCTTTTTAGTTGGCATGCGTTTAAGCAACGATTCCCTGAAAGAGATTATGTTGAATTTTCAAGGAGGATAGTTTCTTACTCAGGAGGTTTACCGCTAGCTCTTGAAGTTCTTGGCTCCTATTTATTTGATAGGGAAGCATTGATATGGGAAAGTGTTCTACAAAAACTACAAAAAATTCCAAATGATAAAATACATGAAAAGCTAAAAATAAGTTATGATGGTTTGAGTGACCAAACAGAGAGAGATATATTCCTTGATATATGTTGTTTTTTTATTGGGAAGGACAAAATCTATGCTACACAAATATTAAATGGTTGTGGACTTCATGCTGATATTGGAATTATTCGTCTCGTAGAGAGGAGCCTCATAAAAGTTGGCAAGAAAAATAAGCTTGATATGCATGACTTACTACGTGATATGGGAAGACACATCATTCGTGAGCAATCACCAGAGGATCCTGAGAAGCAGAGCAGATTATGGTCTCATGATGATGTGCTAGATGTGCTAAGAAATTGCACGGGAACAATAGCGATTAAGGGATTGGCTTTGAACATGTCAACAAACAATTTAGGACCATTGAGTGCCAAAGCATTTGAGAACATGAAGAAGCTTCGTTTGCTCCAACTTGATCATGTACAACTTACTGGAGACTTTGGTTATCTATCAAAGGACTTAAGATGGCTGTGTTGGCATGGATTTCCCTTAGAAAACTTGCCAGCAAATTTAAGTCTCGAAAAGATAGTTGCCATAGACTTAAAGTGGAGTAATCTCACAAAAGTATGGGAGAAAAGTCAGAGGCTAGAGTGGTTGAAAATTCTCAATTTGAGTCATTGTCATCATTTGACAAAGACACCTGATTTTTCAAAGTTACCATATCTTGAAAAGCTAATACTCAAAGATTGTCCGCTTGTGTTTTCGATTCACCCCTCCATTGGAGATCTTAAATACATTGTTCTGTTAAATTTAAAGGACTGCAAAGACCTTAATCATCTCCCAAGAGGTATATATAACTTAAAATCTTTGAAAACTCTCAATCTTTCTGGTTGTTCAAAGATTGAAAAGTTGAAAGAAGACATTGGGCAAATGGAATCCTTGACAACTTTGGTGGCAAATCAAACTTCTATTACACAAGTTCCCTCCTCATTAGTGAGAATGAAAAGTATTAAATTTGTGTCACTATGTGGCTTCGAAGGATTATCGCGCGATGTATTTCCATCGATTGTTATGTCTTGGATGTCACCGACAGTTCATTCGAAGTCCCTGCTACGAGCATTTACGATTATGCCATCTTTAATCAAGGGTCTATCACATCCTTTATTTGCCAGAAGCCGTAAAGTATTAGAAGCAAGACCCAGCACATCTCAAGATTCATGTAGAACTCAAGGGTTAATTGGTTTTCAAGAGAAATCTCACATGGAAAGGTTAGAGCCATTGAGTTCTTTAACTATTCATTTAGGCGGCTTCAACAAAGTTATGGATGCACTTTTAAACAGTATTTCACAGGGATGGAGTGACGGAGGGTTTGACTATTCTCAGCTTCCTCAAGATAATTATCCTGATTGGCTATGTTTTGAGAGTGAAGGATCTTCTGCATCATTTAAAACGCCTCGAGTTTTGGGTTGTTTGATGGGAATGGTAATCTATATTATCTATTCATCTTCTCAAGATAGCATGGCATCCGTATATCCTGTTGGCTTCATGATAAAGAATTTCACAAAGGGTACTATGGACTTTTACAAGAGAGATGATGCAGCGACTTCTGCTGATGATGACTGGCACAAAATAATACTTAATCTAGAGCCTGATAATGAGGTGGAAATTACAGTCAATTTTGCCCAGAAGCATATTGTAAAGAAGACTTTAATCTATCTGGTATGA 3930 0.3715 MSTLKGALYRYLFCNLPPHPVGLLLRSVKDVLRLLMDGTYSIGIWGVPSIGKTTFARAIYDRICGRFERKSFLANINDEWKKDNGLVHLRQQLISDVFDTELDMVHDVKMGASQMKEALSNKSVLVVFDDVNHIDQLIALCGSRDLCFGKRSLVLVTSTSKDLILGLGLYFYEMKALDESESLELFSWHAFKKSSPTDDFMSLSGKAINFCEGLPLALEVIGSLLLNRTKKEWNNVLKKLRGIPRGQIKEKLKISLNFLTDSEKDLFYNIASFYVGLNKHDVTQLLKGSKSPVEKAMHEIIERGLVKVDMSDKLDVHHLLREIGREISPKKIKHEYIYDVFLSFRGEDTRKSFTTHLCTALKKAGIEVFMDEEGIGRGEAISSSLLQAIESSRMSIIIFSKNYAGSSWCLQELEKIMECHKTTHQEVLPIFYDVQPSEVRKLQNIFGEAWKRLTLRNSTSKVKKSMINWKRALIEAANISGWDMHECRTETELIDDVVETITMKLDSKDLFVAHHPVGVEPRVQDIIKLLINKSNEVIIAGIWGMGGIGKTTIAKAIFNEIGQTFEGKCFLSNVREVWKQDNGQVYLQKQILSSIFNARRVKLTSIEMGTTLIKQMLCKKRVLIVLDDVNNDDQLKALCGNHEWFGRGSRILITTRDERLLKILGVEDHKIYNMKEMNDSESLELFSWHAFKQRFPERDYVEFSRRIVSYSGGLPLALEVLGSYLFDREALIWESVLQKLQKIPNDKIHEKLKISYDGLSDQTERDIFLDICCFFIGKDKIYATQILNGCGLHADIGIIRLVERSLIKVGKKNKLDMHDLLRDMGRHIIREQSPEDPEKQSRLWSHDDVLDVLRNCTGTIAIKGLALNMSTNNLGPLSAKAFENMKKLRLLQLDHVQLTGDFGYLSKDLRWLCWHGFPLENLPANLSLEKIVAIDLKWSNLTKVWEKSQRLEWLKILNLSHCHHLTKTPDFSKLPYLEKLILKDCPLVFSIHPSIGDLKYIVLLNLKDCKDLNHLPRGIYNLKSLKTLNLSGCSKIEKLKEDIGQMESLTTLVANQTSITQVPSSLVRMKSIKFVSLCGFEGLSRDVFPSIVMSWMSPTVHSKSLLRAFTIMPSLIKGLSHPLFARSRKVLEARPSTSQDSCRTQGLIGFQEKSHMERLEPLSSLTIHLGGFNKVMDALLNSISQGWSDGGFDYSQLPQDNYPDWLCFESEGSSASFKTPRVLGCLMGMVIYIIYSSSQDSMASVYPVGFMIKNFTKGTMDFYKRDDAATSADDDWHKIILNLEPDNEVEITVNFAQKHIVKKTLIYLV 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00015 1309 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 338 1083 IPR044974 GO:0006952
Pral4707g00015 1309 Pfam TIR domain 338 506 IPR000157 GO:0007165
Pral4707g00015 1309 Gene3D - 504 670 IPR027417 -
Pral4707g00015 1309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 269 IPR027417 -
Pral4707g00015 1309 SUPERFAMILY L domain-like 831 1096 - -
Pral4707g00015 1309 ProSiteProfiles TIR domain profile. 336 505 IPR000157 GO:0007165
Pral4707g00015 1309 SUPERFAMILY Toll/Interleukin receptor TIR domain 329 482 IPR035897 -
Pral4707g00015 1309 Gene3D - 335 503 IPR035897 -
Pral4707g00015 1309 FunFam Disease resistance protein (TIR-NBS-LRR class) 334 507 - -
Pral4707g00015 1309 SMART till_3 337 479 IPR000157 GO:0007165
Pral4707g00015 1309 SMART AAA_5 38 169 IPR003593 GO:0016887
Pral4707g00015 1309 SMART AAA_5 536 678 IPR003593 GO:0016887
Pral4707g00015 1309 Gene3D Ribonuclease Inhibitor 851 1097 IPR032675 -
Pral4707g00015 1309 SUPERFAMILY "Winged helix" DNA-binding domain 746 853 IPR036390 -
Pral4707g00015 1309 Pfam NB-ARC domain 33 253 IPR002182 GO:0043531
Pral4707g00015 1309 Pfam NB-ARC domain 522 746 IPR002182 GO:0043531
Pral4707g00015 1309 Gene3D - 676 760 IPR042197 -
Pral4707g00015 1309 Gene3D - 176 259 IPR042197 -
Pral4707g00015 1309 Gene3D - 15 167 IPR027417 -
Pral4707g00015 1309 PRINTS Disease resistance protein signature 711 725 - -
Pral4707g00015 1309 PRINTS Disease resistance protein signature 616 630 - -
Pral4707g00015 1309 PRINTS Disease resistance protein signature 539 554 - -
Pral4707g00015 1309 PRINTS Disease resistance protein signature 1020 1036 - -
Pral4707g00015 1309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 510 771 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00015 Pral-Chr4707 283947 295899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00015 41 327 WRKY Transcription Factor Family AT4G12020 26.042 9.47e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00015 - - pcin:129288830 1778.84