Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00013 ATGGGGAAGCGTCCACGTGGCTGCGCGGAAGGAGGAGGGCTGAACAGAGGAGCATGGACGGTTCAAGAGGACAAGTTACTGACTTCTTACATTGAGACACACGGCCAAGCCAAATGGACACGCATCCCTAAGGAGCTGGCTCAGATGGTTAACTATCTCGGGCCTGATATTAAAAGAGGCGGCATTACACAAGATGAAGAAGAACTCATCATTAGGCTTCATAAGCTTCTTGGTAACAGGTGGTCTCTCATAGCTGGAAGGCTACCTGGCCGAGCAGACAATGAAATCAAGAACTACTGGAACACCACTTTGGCCAAAAAGCTCAGAACACAGGCATGTTCAATATCTGAACAACATGGAACAATGAGATCAGCAGTAAGCAATAAGCCTGATGTACCAATCTATGAGGTATCAAAGCAAAACATAGAGATGATTTAA 438 0.4612 MGKRPRGCAEGGGLNRGAWTVQEDKLLTSYIETHGQAKWTRIPKELAQMVNYLGPDIKRGGITQDEEELIIRLHKLLGNRWSLIAGRLPGRADNEIKNYWNTTLAKKLRTQACSISEQHGTMRSAVSNKPDVPIYEVSKQNIEMI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00013 145 ProSiteProfiles Myb-like domain profile. 11 46 IPR001005 -
Pral4707g00013 145 SMART sant 58 106 IPR001005 -
Pral4707g00013 145 SMART sant 15 55 IPR001005 -
Pral4707g00013 145 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Pral4707g00013 145 SUPERFAMILY Homeodomain-like 14 100 IPR009057 -
Pral4707g00013 145 CDD SANT 63 104 IPR001005 -
Pral4707g00013 145 Gene3D - 13 51 - -
Pral4707g00013 145 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Pral4707g00013 145 Pfam Myb-like DNA-binding domain 16 46 IPR001005 -
Pral4707g00013 145 Pfam Myb-like DNA-binding domain 62 103 IPR001005 -
Pral4707g00013 145 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 121 - -
Pral4707g00013 145 Gene3D - 63 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00013 Pral-Chr4707 244158 244817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00013 1 145 MYB Transcription Factor Family AT3G13540 45.806 1.36e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4707g00013 Myb_DNA-binding 9.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00013 K09422 - pda:103712648 163.696