Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00012 ATGGGAGTCAAACAGATAAAGACGGTACTACATAAGAAAAAGGTGCTTATAGTACTTGATGATGTCAACAAAATAGACCAAATAACATTGTTGTGTGGAAGTCGTGAATGGCTTGGAGCAGGGAGTGTCATCTTGATCACCACTAGATATAAGCATATTCTTGATCAACTTAAAGTTGATAATCACTTTAAAGTGAAAAAGATGGACAAAAATGAATCTCTTGAACTTTTTAGTTGCCATGCATTTAAGCAGTTAAATCCTCCAAATGAGTTCATAACTTTCTCCAAGAAAGCTGTTACTTTTTGTGGGGAGTTACCCTTAGCTCTTGAAGTCCTTGGATCTCTTTTGATTGATAAGACATTGCGAGAGTGGAAAAGTTTGATTAAGAAACTTCCAAGATTAAAGAGCAATGCAATACTTGAGATACTTCAACTAAGTTATGAGTACTTAGAAAACTCTGAGAAAGATGTGTTCCTTGAGATAGCTTCCTTTTATGTTGGTAAAGACAGACAACATGTGACAGAAATATTAAATGAGTATGGGTTTTGTGCCGAAGTTGACATAAGTGTGCTTATTGCTCGAGGCCTTCTAAAGGTAGACAAGAATAACAAGTTTGAAATGCATGAATATTTCCGAGATATGGCAAAAAGAATGAATCCTCCTAAGACTCAACCCAAATATGCTAATGATGTTTTCTTAAGTTTTAGAGGTGAAGATACTCGCAAGTCTTTCGTTGGTCATCTTCATGCTACTTTGAAAAATGCTGGCTCGGAGGTTTTCATGGACGACAATCTCAAAAAGGGGAAAAACATCTCGGCTTCACTTTTGCAAGCAATTGAAGTTTCTAGAATTTCAATTATTGTTTTCTCAACAAATTATGCAAGTTCTAGTTGGTGCTTGGAGGAACTAGAGAAAATTATGGAGTGTCACAGACATAACGGTCAACAAATCATGCCTGTATTCTACGATGTGCAAGCATTTGAAGTAAGAAAACAAATAGGCAATTTTGGAAAAGCATTTCATGAACTCATTGCTAGAATCTCAACTAGAAAAGAACAAACTTGGAGAAGAGAGCTCACTGCAGCTGCCAACATATCCGGCTGGGACTCGTACAATTACAGAAATGATGCAGCTTTGATCAATCATATTGTTGAAAGTGTCATGATGAAACTAGATGATAAAGCATACTTATTCATTGCTGATCACCCAGTCGGAGTAGAGTCTCGTATGCAAGAGATTACCAAATTGTTGAGTGGTAAATCAAATGAAATTATCATGGTCGGAATTTGGGGAATGGGTGGTATTGGCAAAACAACTATTGCCAAAGCCATTTTCAATGAATTGGGAAGAAATTTTGAGGGAAAATTTTTCCTAGAAAATGTGAGGAAATTTTGGGAGCAAGCCAATGGCCCAATCAATTTACAAGAACAACTTCTTGCAGGAATTTCAAGAGAAAGAATAACAAGACTACAACACAATGGATTGGGCAAAAATGTGATGAAAGAAAGGCTCTGTCATAAAAGGGCACTTCTTGTGCTTGATGATGTAGATAAGTCGGTCCAAATTAGTACTCTATGTGGAAGTCGTGAATGGTTTGCTCCGGGAAGTAGAATAATCATAACTACTAGAGATAAGCATCTACTTGATCTTCTCCAAGTGGATAAAGTATACAATATGAAAGAATTGGAGGACTTTGAATCCCTTGAACTTTTTAGTTGGCATGCTTTTAAGCAGGTCAATCCGATAGAAAATTATGTTGAACTCTCAAAAAGGGTAATTGCTTACTCTAGAGGATTGCCATTGGCTCTTGAAGTTCTTGGTTCATATTTATTCGATAGAGCAATATCTGCTTGGGAGAGTGTTTTGGAAAAGCTACAAAAAATTCCAAATGATCATATATATGAAAAGTTAAAAATAAGTTATGATGGGTTGAGTGATCATATGGAGAAAGATATATTTCTTGACATTTGTTGTTTCTTTATTGGTGAAGATAGAAGTTATGTTACACAAATTTTAAATGGGTGTGGACTTCATGCAGAAATTGGAATTACACGACTTATAGAGCAAAGTCTTATAAGAGTTTATAAGAATAACAAGCTTGGTATGCATAGTTTATTATGTGATATGGGAAGAGAGATCATTCGTGAGACATCACCAAAACCTGAAGAACGTAGCAGATTGTGGTTTTATGATGAGGTCCTCTATGTGTTGAAAAATAATATGGGAACTAAAAGCGTTAAGGGGCTGGCTTTGAACTTATCAAGAAACAATACCTTATCCTTCAACACTAAAGCATTCAAGGAGATGAAGAGACTTCAGTTGCTTCAACTTAATCATGTAAGACTTCTTGGGGACCATGAGTATCTTTCAAAAGACTTGCGATGGCTACGTTGGCATGGGTTTCCTTTAAGTTACATGCCAGAGAACTTCTGTCAGGAAAATTTAATTGCTGTTGACTTAAAATACAGTGGTCTCATACAAGTATGGAAGGATAGCCAGATGTTGGAGAGGATGAAAATTCTTAATCTTAGTCATTCTTGTTATTTGGAGCAAACGCCCGACTTTTCAAAGCTGCCAAATCTTGAAGAGTTGATACTTGAAGATTGCAAGAGTTTATCTGTTGTTCACTCATCCATTGGATGTCTTAAATATCTTATCTTGTTAAATCTAAGGGATTGTGAACGGCTCATCCATCTCCCAAGGAGTATCTACAATTTGAAGAATTTAAAAACTTTCAATATCGATGGTTGCTCAAAAATTGATAAGTTGGAAGAAGATATTGAGCAAATGGAATCTTTGACTACTCTAATGGCAAATCAAACTGCAATAACACAAGTTCCTTTTTCATTGATGAGATCAAAAAGCATTAAATATGTGTCTCTTTGCGGCTATGAAGGACTATCTCATAATGTATTTCCACCTCTCATTTGGTCTTGGATGTCACCAAAAAGTATTCCAAAGTCCTTGATTTGGAGCATACCATATTTATTCCAAGGTCTTTCACGTAGTTTATTTGCCAAAAGTAGTGCAATGATGAGATCAAGCTCCAGTAAATCTCAAGTTTCATGCAAAAAGACTCCAGCAACAGTCGACTTTCATGAGCAAGTTCTCATGCCAAGGTTGGAAAATTTCATGAGTTCTCTAATTATTCGTGTAGGAGAGTTCAACAAGGACATAGATACACTTTTGAAGCATATCTCACAGGGATTGAGCGAATTTGGAGACAGTTCTCTTCCTGGAGACAATTATCCTAAATGGCTAAACTTCAATGGTGAAGGATCCTCAATATTATTCAAGGTTCCTCAAGTTCCTTCTAGAAACTTGAAAGGATTAATCCTATACATTGTCTATATTTCTCATGAGGACAACATGGCATCTGCATATCCTGTCAGTGTCTTGGTATCAAATCACACAAAAGTTACTATTGAATTCTACAAGCTAGATACAGTAATTGCCTCTGCTGACGAAGAATTGGGTAGCATAATTCCTAATTTGGAGCCTGAGAATGAAGTGGAGTTTAAAGTAACTTTTGCACACAAGTTTGATATAAAGAAGACAATAATCTATTTGGTGTATGATGAAGATGTTGGCAAAAGAATCATGAATTGA 3609 0.3605 MGVKQIKTVLHKKKVLIVLDDVNKIDQITLLCGSREWLGAGSVILITTRYKHILDQLKVDNHFKVKKMDKNESLELFSCHAFKQLNPPNEFITFSKKAVTFCGELPLALEVLGSLLIDKTLREWKSLIKKLPRLKSNAILEILQLSYEYLENSEKDVFLEIASFYVGKDRQHVTEILNEYGFCAEVDISVLIARGLLKVDKNNKFEMHEYFRDMAKRMNPPKTQPKYANDVFLSFRGEDTRKSFVGHLHATLKNAGSEVFMDDNLKKGKNISASLLQAIEVSRISIIVFSTNYASSSWCLEELEKIMECHRHNGQQIMPVFYDVQAFEVRKQIGNFGKAFHELIARISTRKEQTWRRELTAAANISGWDSYNYRNDAALINHIVESVMMKLDDKAYLFIADHPVGVESRMQEITKLLSGKSNEIIMVGIWGMGGIGKTTIAKAIFNELGRNFEGKFFLENVRKFWEQANGPINLQEQLLAGISRERITRLQHNGLGKNVMKERLCHKRALLVLDDVDKSVQISTLCGSREWFAPGSRIIITTRDKHLLDLLQVDKVYNMKELEDFESLELFSWHAFKQVNPIENYVELSKRVIAYSRGLPLALEVLGSYLFDRAISAWESVLEKLQKIPNDHIYEKLKISYDGLSDHMEKDIFLDICCFFIGEDRSYVTQILNGCGLHAEIGITRLIEQSLIRVYKNNKLGMHSLLCDMGREIIRETSPKPEERSRLWFYDEVLYVLKNNMGTKSVKGLALNLSRNNTLSFNTKAFKEMKRLQLLQLNHVRLLGDHEYLSKDLRWLRWHGFPLSYMPENFCQENLIAVDLKYSGLIQVWKDSQMLERMKILNLSHSCYLEQTPDFSKLPNLEELILEDCKSLSVVHSSIGCLKYLILLNLRDCERLIHLPRSIYNLKNLKTFNIDGCSKIDKLEEDIEQMESLTTLMANQTAITQVPFSLMRSKSIKYVSLCGYEGLSHNVFPPLIWSWMSPKSIPKSLIWSIPYLFQGLSRSLFAKSSAMMRSSSSKSQVSCKKTPATVDFHEQVLMPRLENFMSSLIIRVGEFNKDIDTLLKHISQGLSEFGDSSLPGDNYPKWLNFNGEGSSILFKVPQVPSRNLKGLILYIVYISHEDNMASAYPVSVLVSNHTKVTIEFYKLDTVIASADEELGSIIPNLEPENEVEFKVTFAHKFDIKKTIIYLVYDEDVGKRIMN 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00012 1202 Pfam NB-ARC domain 4 148 IPR002182 GO:0043531
Pral4707g00012 1202 Pfam NB-ARC domain 407 631 IPR002182 GO:0043531
Pral4707g00012 1202 FunFam Disease resistance protein (TIR-NBS-LRR class) 225 393 - -
Pral4707g00012 1202 SUPERFAMILY Toll/Interleukin receptor TIR domain 223 368 IPR035897 -
Pral4707g00012 1202 Gene3D - 226 393 IPR035897 -
Pral4707g00012 1202 Pfam TIR domain 230 391 IPR000157 GO:0007165
Pral4707g00012 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 656 IPR027417 -
Pral4707g00012 1202 Gene3D - 67 151 IPR042197 -
Pral4707g00012 1202 Gene3D - 562 652 IPR042197 -
Pral4707g00012 1202 SUPERFAMILY "Winged helix" DNA-binding domain 138 217 IPR036390 -
Pral4707g00012 1202 Gene3D - 2 63 IPR027417 -
Pral4707g00012 1202 Gene3D - 394 556 IPR027417 -
Pral4707g00012 1202 PRINTS Disease resistance protein signature 596 610 - -
Pral4707g00012 1202 PRINTS Disease resistance protein signature 503 517 - -
Pral4707g00012 1202 PRINTS Disease resistance protein signature 426 441 - -
Pral4707g00012 1202 PRINTS Disease resistance protein signature 856 872 - -
Pral4707g00012 1202 ProSiteProfiles TIR domain profile. 227 391 IPR000157 GO:0007165
Pral4707g00012 1202 Coils Coil 920 940 - -
Pral4707g00012 1202 SMART till_3 228 365 IPR000157 GO:0007165
Pral4707g00012 1202 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 230 934 IPR044974 GO:0006952
Pral4707g00012 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 159 IPR027417 -
Pral4707g00012 1202 Gene3D Ribonuclease Inhibitor 734 999 IPR032675 -
Pral4707g00012 1202 SUPERFAMILY "Winged helix" DNA-binding domain 632 738 IPR036390 -
Pral4707g00012 1202 SUPERFAMILY L domain-like 750 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00012 Pral-Chr4707 220469 229745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00012 202 950 WRKY Transcription Factor Family AT4G12020 29.481 8.62e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00012 - - pcin:129288182 1345.1