LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4707g00010	ATGGGTAAAACTACCATCGTGAGAGCTATTTATGATATAATTGGTGGCCATTTTAAGTACACAAGTTTTCTTGCTAATATCAAGGGTAAATGGGAGGACGATGATAATGGTCAACTTCTGTCACTAAGTCAACATCTGAACCATATGAAACAAGGAACTTATGAAAGAGCCCTAGTGGTAATTGATGGTGTAAATCAAGTAGCCGAACTCGATAACCTGTGTAGAAATAGACAACAGTTTGGTAAAGGGAGTTTGATTTTGATTACAACAAGAGAACAGCTACTTGATAACTTTGTTGACAAATCATATGAAATGAAAAAGTTGGACAACAATGAATCTTTTGAGCTTTTCAGTTGGCATGCATTTAAAAGCTTTGATCCAACAAATGATTTTGTGAATCCATCTAGGAAAATAATTCCTTTATGTGAAGGGCTACCATTGATTCTTGAAGTTGTAGGCTCTCTTTTGTGTAATAAGGAAAAATCAGAGTGGAAAAAAGTATTGAATAAATTAAAAGATGTTCCAAAAGGCCATATACAACGTAAGCTTAAAATAGGCCTGGACCTTTTGGCTGATGCAGAAAAGGAATTATTTTGTGACATAGCACACTTTCATGTGGGTCGGAGTATTAGTGATTTTATAAATTTGTTTATGGACTCAACGGCAATGCAAGTACTTGTAGAGTGCGGCCTTGTAAAGGTTATCAATGACAAGATTCATGTGCATGATTTGCTGCAAGAGATAGGGAGGGGAATCACTACAGACAATAAGCCAAAATTCACATGTCTCTATGATGTATTCTTAAGTTTTAGAGGTGGGGATACGCATAAATCATTTACCACTCATCTTTATAATGCTATGAAACAAGTAGGAATTGAGGTTTTCATGGATGAAGAAAGGATTGACAGGGGGGAACACATTTCAACTTCGTTACTGGGGGCAATTGAAAATTCTAGAATTTCAATCATTATATTCTCAACAAATTATGCCGGCTCTAGTTGGTGCTTGCAAGAATTAGAGAAAATCATGGAGTGTTACAAAACTCATCAAGAGGTTTTCCCTATATTCTATGATGTGCACCCATCTGATGTCCGTAAACAACAAAATGCCTTTGGAAAAGCATGGGAAAGACTTACAACAAGACCCTCAGGTAGCAAGGGTAAGAAATTCACAAACAATTTGAAGAGGGTCCTTGCTGAGGCTGCCAACCTATCAGGGTGGGACATGCAAAACTATAGAACTGAGACTGAGTTACTTGACGATGTTGTGAAAACTATCACAATGAGGCTAGACAATAGCAAATACATGTTTGTTGCTCACCATCCAGTGGGTTTGGAGTCTCGAGTGCAAGATATCATCCAACTGCTAAGTAGTGAATCAAATGACATCATCGTAATAGGCATTTTGGGGATGGGAGGAATTGGCAAGACCACGGTGGCTAAAACTATTTACAATGAAATGGGCCAAAGTTTTGTGGGAAAGAGTTTCCTTGCAAATATTAGGGAAGTATGGAAACAAGATAATGGTCAAGTTTATTTGCAAGAACAACTTATTTCTAGTATCTTCAAAACAAGACGGATCAAGCTACCAAATGCGGGGAGGGGGAAATCTCTAATCAAGGAAATTCTTTGTCAAAAAAGAGTATTTTTTGTATTAGATGATGTCAATAATGAAGAACAACTCAAAGTTTTATGTGGGAGTCATGAATGGTTTGGCCAAGGAAGCAGAATAATTATTACGACAAGAGACCAACGTTTACGTCAAATCCTTCAAGTGGATAAAGTATTTAGTGCAAGGGAAATGGATGATAATGAATCTATTGAGCTTTTCAGTTGGCATGCGTTTAAGCAAGCACTTCCCGAAAGAAATTTCATTGAACTTTCGAGAAGAGTAGTATCATACTGTGGAGGGCTGCCACTAGCTCTTGAAATCCTTGGCTCATATTTGTTTGACAGGGAAAGACCTTATTGGGAAAATGCTTTGAGTAAATTGAAACAAATTCCTAATTGTAAAATATATGAAATTCTAAAGATAAGCTATGATGGTTTGAGTGATAAAATGGAGCAAGAGCTATTCCTAGACATATGTTGTTTTTTCATTGGAAAGGATAGAAGTTATGCAACTCAAGTACTAGATGGCTGTGGACTCTATGCAGAAATTGGAATTACCCATCTAATTGAGCGAAGCCTTGTAAAAGTTGTAAAATTTGAAAACAAAAACGTACTTGATATGCACGACTTGCTACGTGATATGGGAAGAGAAATCATTCGTGAACAATCACCAGAGGAGCCAGAGAAGCGTACAAGATTATGGTTTAATGATGATGTGTTGAATGTGCTAGGAAACAACATAGGAACAATAGCTATCAAGGGATTGTCTTTAAACATGCCAAGAAACAATTCAATACCCTTGAGTACCAAGGCATTTAAGAAGATGAAGAGGCTTCGTTTACTCAACTTTGATAATGTACAACTTGATGGAGACTATGGTCATCTATCAAAAGAACTTAGATGGCTT	2517	0.3691	MGKTTIVRAIYDIIGGHFKYTSFLANIKGKWEDDDNGQLLSLSQHLNHMKQGTYERALVVIDGVNQVAELDNLCRNRQQFGKGSLILITTREQLLDNFVDKSYEMKKLDNNESFELFSWHAFKSFDPTNDFVNPSRKIIPLCEGLPLILEVVGSLLCNKEKSEWKKVLNKLKDVPKGHIQRKLKIGLDLLADAEKELFCDIAHFHVGRSISDFINLFMDSTAMQVLVECGLVKVINDKIHVHDLLQEIGRGITTDNKPKFTCLYDVFLSFRGGDTHKSFTTHLYNAMKQVGIEVFMDEERIDRGEHISTSLLGAIENSRISIIIFSTNYAGSSWCLQELEKIMECYKTHQEVFPIFYDVHPSDVRKQQNAFGKAWERLTTRPSGSKGKKFTNNLKRVLAEAANLSGWDMQNYRTETELLDDVVKTITMRLDNSKYMFVAHHPVGLESRVQDIIQLLSSESNDIIVIGILGMGGIGKTTVAKTIYNEMGQSFVGKSFLANIREVWKQDNGQVYLQEQLISSIFKTRRIKLPNAGRGKSLIKEILCQKRVFFVLDDVNNEEQLKVLCGSHEWFGQGSRIIITTRDQRLRQILQVDKVFSAREMDDNESIELFSWHAFKQALPERNFIELSRRVVSYCGGLPLALEILGSYLFDRERPYWENALSKLKQIPNCKIYEILKISYDGLSDKMEQELFLDICCFFIGKDRSYATQVLDGCGLYAEIGITHLIERSLVKVVKFENKNVLDMHDLLRDMGREIIREQSPEEPEKRTRLWFNDDVLNVLGNNIGTIAIKGLSLNMPRNNSIPLSTKAFKKMKRLRLLNFDNVQLDGDYGHLSKELRWL	839

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4707g00010	839	Pfam	TIR domain	264	428	IPR000157	GO:0007165
	Pral4707g00010	839	SUPERFAMILY	Toll/Interleukin receptor TIR domain	258	407	IPR035897	-
	Pral4707g00010	839	ProSiteProfiles	TIR domain profile.	262	430	IPR000157	GO:0007165
	Pral4707g00010	839	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	264	839	IPR044974	GO:0006952
	Pral4707g00010	839	SMART	till_3	263	404	IPR000157	GO:0007165
	Pral4707g00010	839	Gene3D	-	107	195	IPR042197	-
	Pral4707g00010	839	SUPERFAMILY	"Winged helix" DNA-binding domain	671	780	IPR036390	-
	Pral4707g00010	839	FunFam	Disease resistance protein (TIR-NBS-LRR class)	261	432	-	-
	Pral4707g00010	839	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	435	695	IPR027417	-
	Pral4707g00010	839	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	1	201	IPR027417	-
	Pral4707g00010	839	Gene3D	-	1	106	IPR027417	-
	Pral4707g00010	839	Gene3D	-	430	595	IPR027417	-
	Pral4707g00010	839	Gene3D	-	263	429	IPR035897	-
	Pral4707g00010	839	Gene3D	-	600	684	IPR042197	-
	Pral4707g00010	839	PRINTS	Disease resistance protein signature	542	556	-	-
	Pral4707g00010	839	PRINTS	Disease resistance protein signature	635	649	-	-
	Pral4707g00010	839	PRINTS	Disease resistance protein signature	465	480	-	-
	Pral4707g00010	839	Pfam	NB-ARC domain	446	668	IPR002182	GO:0043531
	Pral4707g00010	839	Pfam	NB-ARC domain	42	179	IPR002182	GO:0043531

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4707g00010	Pral-Chr4707	181186	186602	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4707g00010	258	820	WRKY Transcription Factor Family	AT4G12020	29.401	1.72e-58	216

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4707g00010	-		-	pcin:129288830	1115.52