Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00009 ATGTCTTCCTTGGCCACTTCATCCTCTCAACACAAATCAACTTCCGAATACGGCGTGTTCTTAACTTTCTTTAATGGTCTTGAAAATCGTGTAAGAACCATTCTTGAGAACTGTTTTAAGGATGGTGGGTACAAAACTTTCATGGCCGACATCGTCAATGTTTCCACATGGGATATGACAAGAATGTGTAGAATTGTGGCGGTGGTAATCACACCAGAGTTCGTTAACTCCGACGGATGTTTTGAGAGACTGATGAATATGTCATGGGATCCCAAAACAGTGGTGCCTTTCTTCTATGGAGTGCGCCACAAAGAAGTGTGTTTGCAGTTCGAGAGTTTCTATTCGCGAAGGTTTGAGAATGAATTTGGAGAGCCAATATTTGAGATTCCATTTTCTATTGGGATTTGCAACAAAGAGCTGACGCTCGACCAAGAAGTTGTCAATAACTTCATTGGAAAAGCTATATCACAAGTAGGGTTGCAACGTCGTGTGAAAGAAGTGCTACATCAATTGTGCGAGAAATACCATAATGAGAAAAGTACAATCATAGTCAAAATTTGGGGGGTTGGAGGTGTTGGTAAAACTACCATCGCAAGAGCTATTTATGATGCAATTGGTGGCCATTTTAGTTGCAGAAGTTTCCTTGCTAATATCAACGATGTCTGGAAGAACATCAATGGTCAAGTTCTTCTACAAAAGCAACTTCTTTCAGATATTCAAGAGAATCATGTGAAGCAACGACCTTATAGAAGAGCCTTAATTGTACTTGATGATGTAAATCAAGAAGGCCAACTCACTGGATTATGTGGAAATAGAGAGCAATTTGGTAAAGGGAGCTTGATTTTCGTTATGACAAGAAATAAGAGTTTACTTGATCACTTTGTTGACATATCATATAAAGTGGAACAGTTGGACCACGATTACGGAAATTTGGTGATTCAATTTTCGATTGGAATTCGCAACGAAGAGCCGACGCTGAGTGTTCTTCGCTATGGCTTCACACTGTCGCATGATTTTGGGGACCAAGAAGTAGTCCATACCCTCATCGCAAAATCCATATCACAGGTAGGGGTTCAATCTCGTGTGAAAGAAGTGCTTCGCCGATTAGGCTGGGAATCCCACAGTGAGGAAAGTACAACCATAGTCGGAATTTTGGGGGTTGGAGGTATTGGTAAAACCACCATTGCCAGAGCTATTTATGATTCAATTGGTGGGCATTTTAATTGCAAAAGTTTCCTTGCTAATATCAAGGATGTGTGGAAGAACAAGAATGGTAAAGTTCTTCTACAAAAGCAACTTCTTTCAGATATTCATGTGAAACCTATTAATCAGGGATCGTATAGAAGAGCCCTAATTGTGCTTGATGATGTAGACCAAGCAAGTCAACTCATTAAACTGTCTGGAAATATAGAGCAATTTGGTAAAGGGAGTTTGATTTTCATTACAACAAGAAATAAGGATTTACTTGATGACTTTGTTGACATCTCATATGAAGTGGAAAAGTTGGGCGAGCGTGAGTCTCTAGAGCTTTTTGGTTGGCATGCATTCAAAAACTTTGGTCCAACAAATGATATTGTGGATCTTTCTATGAAAGTAATTACTTTATGTGAAGGGCTACCATTGCTTCTTGAAGTCATAGGCTCTCTTTTACATAATAAGACAAAATCAGAGTGGATAAAGATATTGAATAAATTAAAAAAGGTTTCAGGTGGCCAAATACAATATAAGCTTAAAATCAGTGTAGACTTTTTAGCAGATTCAGAAAAGAAATTATTTTGTGATATAGCACACTTTTATGTGGGACGGAGTAAAAGTTATGTTATAAATTTGTTTAAGAGCTCAAGATTCCCCTTGTTGGCCAAAAACAGCTCAAGGTTCCCATTGTTGGCCAAAAAGAGCTACAGAAAATTGCCCATAGAAATGGCAATGCAAGTACTTATTGAGCGTAGCCTTGTAAAGGTTATCAATGACAAGATTCATGTGCATGACCTGCTGCAAAAAATAGGAAGGGAAATCGCACCAACAAACAAGCAAAATTTCATACATACTTATGACGTGTTCTTAAGTTTTAGAGGTGCAGACACGCGTAAATCATTTGCTACTCATCTTTATAATGCTCTAAAACAAGCAGGAATTGAAGTCTTCATGGATGAAGAGAGAATTGAAAGGGGAGAACAAGTTTCAGGTTCATTACTGCAAGCAATTGAAAATTCTAGAATTTCAATTATTATATTCTCAGAAAATTATGCTGACTCTAATTGGTGCTTGCAAGAATTAGAGAAAATCATGGAGTGTTACAAAACAACTGATCATGAGGTTTTTCCTATATTCTATGATGTGCAACCATCTGATGTTCGCAAACAACAAAATGCCTTTGGAAAAGCATGGGAAAGGCTTATAACAAGACCCTCAAGTAGTAAAGGTAAAAAATCGACAAACAATTTGAAGACAGTCCTCGCTGAGGTTGCTAACTTGTCAGGGTGGCATACGCAAAACTACAGAACTGAGGCCGAGTTACTTGATGATGTTGTTAAAACTATCACAATGAGGATAGACAATAGGAAATATATTTTCGTTGCTCACCATCCAGTTGGTTTAGAGTCTCGCGTGCAAGATATCATCCAATTTCTAAGTGAATCAAATGGGATTACCATAATAGGCATTTGGGGGATGGGAGGGATTGGTAAGACGACGATGGCTAAAACTATCTATAATGAAATGGGGCAAAGTTTTGTAGGAAAGAGTTTCCTTGCAAATATTAGGGAAGTATGGAAGCAAGACAATGGTCAAGTTTATTTGCAAGAACAACTTCTCTCTAGCATCTTAAGAACAAGAAGGATCAACCTACTGAATGTAGGGATAGGAAAATCTATAATCAAGCAAAGTCTCTATCAAAAAAGAGTATTTCTTATATTGGATGATGTGGATAATGAAGACCAACTCAAAGTTTTATGTGGCAGTCGTCAATGGTTTGGTCAAGGTAGTAGAATAATTATCACTACAAGAGATGAACGCCTACTTCAAATCCTTCAAGTGGATAAAGTATTTAATGTGAGGGGAATGGATGATAACGAATCTATTGAGCTTTTCAGCTGGCATGCTTTTAAACAAGCGCTTCCTGAAGGAAATTTCATTGATCTTTCAAGAAAGGTAGTATCATATTGTAAAGGTCTGCCACTGGCTCTTGAAATCCTTGGCTCATATTTGTTTGATAGGAAAATACCTTATTGGGAAAGCACTTTGAGTAAATTGGAACGAATTCCAGATGGTAAAATATATGAAATTCTAAAAATAAGTTATGATGGTTTGAGTGAACAAATAGAGAAAGAGCTTTTCTTGGACATATGTTGTTTTTTCATTGGGAAAGATAGAAGCTATGCTATTCAGGTATTAGACGGTTGTGGACTTCATGCAGAAACTGGAATTACCCATCTAATTGAGCGAAGCCTAGTAAAGGTTGTAAAATCTGGAAACAAAAGCATACTTGATATGCATGACTTACTACGTGATATGGGAAGAGAAATAATACGTGGTCAATCACCAGAGGAGCCAGAAAAGCGTACAAGATTGTGTTTTAATGATGAGGTGTTGGAAGTGTTAGAAAACAACACTGGAACAATAGCTACCAAGGGATTATCATTAAACATGCCGAGAAGCAATTCAATATCCTTGAGTACAAATGCGTTTAAGAATATGAAGAGGCTTCATTTACTCAATCTTGATAATGTACAGCTTAATGGAGAATATGATTATCTATCAAAAGAATTGAGATGGCTTTGTTGGCGTAGATTTCTCTTGGAGAGTTTGCCAACAGACTTTAATGTAAAGAAGATAGTCGCCATTGACTTAAAGTGGAGTAATCTCACAAAATTGTGGGAGAAAAGTCAGGTGCTGGAATCCTTGAAAACTCTCAATTTGAGTCATTCTCATTGCCTAACAGAAACACCTGACTTTTCAAAATTACCACATCTTGAGAAGCTGATACTTAAAGACTGTCCACGTTTGTCTATGATACACCCTTCCATTGGAAATCTTAGGCATCTTATTATGTTGAATTTGAAAAATTGCGTTGGCTTAGAGCATCTCCCAAGAAGTATATATGACTTGACATCTTTGAGAACTCTCAATCTTTTTGGTTGTTCAAAGATTGAAAGGTTGGATGAAGACATTGAAAAAATGGAATCCTTAACGGTTTTGGTGGCAACTCAAACTGCCATAACACAAGCACCCATCTCATTAGTGAGATTGAAGAACATTAAATATGTTTCTTTATGTGGTTATGAAGGATTGTCACGTGATGTATTTCCATCTCTTATTTTGTCTTGGATGCCCCCAACAAATCATTCAAAGTCCTTGTTTCAAGCATTTAGGATCATGCCATCGTTAATCAAGATTCTTTCACATCCTTTGTTTACCAAAAGTTGTGAAATATTTAAAGCAAAACAAGGATCATCTCAAGCTTCATGTAAAAAGACTCCAGCATTGATTGGTTTTGGCGAGCAACTTCGCAAGGAAAGATCAGAAACATTCATGAGTTCTATAACAATTCATGTAGGCGAGTTCAACAAAGTTATTGACTCACTTTTAAGGAGCATTTCACAGGTTATTCTCTTTATCTCTCTACTGCCACCATGCATAGTTTAG 4644 0.3725 MSSLATSSSQHKSTSEYGVFLTFFNGLENRVRTILENCFKDGGYKTFMADIVNVSTWDMTRMCRIVAVVITPEFVNSDGCFERLMNMSWDPKTVVPFFYGVRHKEVCLQFESFYSRRFENEFGEPIFEIPFSIGICNKELTLDQEVVNNFIGKAISQVGLQRRVKEVLHQLCEKYHNEKSTIIVKIWGVGGVGKTTIARAIYDAIGGHFSCRSFLANINDVWKNINGQVLLQKQLLSDIQENHVKQRPYRRALIVLDDVNQEGQLTGLCGNREQFGKGSLIFVMTRNKSLLDHFVDISYKVEQLDHDYGNLVIQFSIGIRNEEPTLSVLRYGFTLSHDFGDQEVVHTLIAKSISQVGVQSRVKEVLRRLGWESHSEESTTIVGILGVGGIGKTTIARAIYDSIGGHFNCKSFLANIKDVWKNKNGKVLLQKQLLSDIHVKPINQGSYRRALIVLDDVDQASQLIKLSGNIEQFGKGSLIFITTRNKDLLDDFVDISYEVEKLGERESLELFGWHAFKNFGPTNDIVDLSMKVITLCEGLPLLLEVIGSLLHNKTKSEWIKILNKLKKVSGGQIQYKLKISVDFLADSEKKLFCDIAHFYVGRSKSYVINLFKSSRFPLLAKNSSRFPLLAKKSYRKLPIEMAMQVLIERSLVKVINDKIHVHDLLQKIGREIAPTNKQNFIHTYDVFLSFRGADTRKSFATHLYNALKQAGIEVFMDEERIERGEQVSGSLLQAIENSRISIIIFSENYADSNWCLQELEKIMECYKTTDHEVFPIFYDVQPSDVRKQQNAFGKAWERLITRPSSSKGKKSTNNLKTVLAEVANLSGWHTQNYRTEAELLDDVVKTITMRIDNRKYIFVAHHPVGLESRVQDIIQFLSESNGITIIGIWGMGGIGKTTMAKTIYNEMGQSFVGKSFLANIREVWKQDNGQVYLQEQLLSSILRTRRINLLNVGIGKSIIKQSLYQKRVFLILDDVDNEDQLKVLCGSRQWFGQGSRIIITTRDERLLQILQVDKVFNVRGMDDNESIELFSWHAFKQALPEGNFIDLSRKVVSYCKGLPLALEILGSYLFDRKIPYWESTLSKLERIPDGKIYEILKISYDGLSEQIEKELFLDICCFFIGKDRSYAIQVLDGCGLHAETGITHLIERSLVKVVKSGNKSILDMHDLLRDMGREIIRGQSPEEPEKRTRLCFNDEVLEVLENNTGTIATKGLSLNMPRSNSISLSTNAFKNMKRLHLLNLDNVQLNGEYDYLSKELRWLCWRRFLLESLPTDFNVKKIVAIDLKWSNLTKLWEKSQVLESLKTLNLSHSHCLTETPDFSKLPHLEKLILKDCPRLSMIHPSIGNLRHLIMLNLKNCVGLEHLPRSIYDLTSLRTLNLFGCSKIERLDEDIEKMESLTVLVATQTAITQAPISLVRLKNIKYVSLCGYEGLSRDVFPSLILSWMPPTNHSKSLFQAFRIMPSLIKILSHPLFTKSCEIFKAKQGSSQASCKKTPALIGFGEQLRKERSETFMSSITIHVGEFNKVIDSLLRSISQVILFISLLPPCIV 1547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00009 1547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 1115 IPR027417 -
Pral4707g00009 1547 ProSiteProfiles TIR domain profile. 682 851 IPR000157 GO:0007165
Pral4707g00009 1547 Gene3D - 138 298 IPR027417 -
Pral4707g00009 1547 Gene3D - 336 495 IPR027417 -
Pral4707g00009 1547 Gene3D - 850 1015 IPR027417 -
Pral4707g00009 1547 Gene3D Ribonuclease Inhibitor 1190 1463 IPR032675 -
Pral4707g00009 1547 SUPERFAMILY L domain-like 1164 1442 - -
Pral4707g00009 1547 Gene3D - 679 849 IPR035897 -
Pral4707g00009 1547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 595 IPR027417 -
Pral4707g00009 1547 SMART till_3 683 825 IPR000157 GO:0007165
Pral4707g00009 1547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 317 IPR027417 -
Pral4707g00009 1547 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 116 IPR035897 -
Pral4707g00009 1547 Pfam NB-ARC domain 867 1090 IPR002182 GO:0043531
Pral4707g00009 1547 Pfam NB-ARC domain 162 300 IPR002182 GO:0043531
Pral4707g00009 1547 Pfam NB-ARC domain 362 571 IPR002182 GO:0043531
Pral4707g00009 1547 Pfam TIR domain 684 847 IPR000157 GO:0007165
Pral4707g00009 1547 SUPERFAMILY Toll/Interleukin receptor TIR domain 682 828 IPR035897 -
Pral4707g00009 1547 PRINTS Disease resistance protein signature 1055 1069 - -
Pral4707g00009 1547 PRINTS Disease resistance protein signature 962 976 - -
Pral4707g00009 1547 PRINTS Disease resistance protein signature 885 900 - -
Pral4707g00009 1547 PRINTS Disease resistance protein signature 1296 1312 - -
Pral4707g00009 1547 Gene3D - 1021 1104 IPR042197 -
Pral4707g00009 1547 Gene3D - 501 584 IPR042197 -
Pral4707g00009 1547 FunFam Disease resistance protein (TIR-NBS-LRR class) 681 853 - -
Pral4707g00009 1547 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 684 1406 IPR044974 GO:0006952
Pral4707g00009 1547 SMART AAA_5 180 310 IPR003593 GO:0016887
Pral4707g00009 1547 SMART AAA_5 882 1022 IPR003593 GO:0016887
Pral4707g00009 1547 SMART AAA_5 378 503 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00009 Pral-Chr4707 159115 173716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00009 332 672 WRKY Transcription Factor Family AT4G12020 26.087 1.01e-13 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00009 - - pcin:129288830 1509.97