Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00007 ATGTCTTCCTTGGCCTCTTCATCCTCTGAACCCAAATTGACCTTCGAATACGATGTCTTCTTAACTTTCAATGGTCTTGCAGATGGGGTAAGAACCTTTCTTGAGGATTGTTTAAGGAACGCTGGATTCAAAACTTTCATTCATGACATGGTCAGGGATTATTCCACATGGGAGATGATGGAAAGGTGTAGAATTGTGGTGGTGGTAATCACACCAGACTTTGTTTGGTCCGGCAAATGTCTTGAGATACTTCTGAATTTAATGCCTGGTCCCAAAACAGTGTTGCCTTTCTTCAATGGAATGAGCAAGAATGAAGCGCGTGTGCAGTTCGAGAGCTTCCATTTGCGAAGATATGAGAACGAAGTTAGTTACTACGAACTGAATTTGCATATGCGAAGATTTGAGAATGAATTGAGTGTGCTGTTGGAGATTTTGCATTTGCCAAGGTCTAATGATGATTATATCTTCGATTGGGACTTCCAACCAAGAGCCGACGCTGTGTGTGATTCGCTACATGGCTTCTCACTGACGGATGATTTTGGGGACCAAGAATTGGTCAATAACCTTATTGCAAAAGCCATATCACAAGTAGGGTTGCTACCTCGTGTGAGACAAGTGCTTGACCGATTAGGCTGGAAATCCCATCATGTAGAAAATACAATCATAGTCGGAATTTGGGGGGTTGGAGGTGTCGGCAAAACTACCATTGCCAGAGCTATTTATGATACAATTGGTATCCATTTCAATTGCAAAAGTTTCCTTGCTAATATCAAGGATGCATGGGAGAAAAATAATGGTCAAGTTCTTCTACAAGAGCAACTTCTTTCAGATATTCATGTGAATCATATGAGGCAAGGACCTTATAGAGGGGCCCTAATAGTACTTGATGATGTAAATCAAGTAGGCCAACTCACTGAACTGTGTGGAAATGGAGAGCAGTTCGGTAAAGGGAGCTTGATTTTTGTCACAACAAGAAACAAGGATTTACTTGATCACTTTGTTGACAAATCATGCAAAGTGGAAAAGTTGGATGACAGTGAGTCTCTTCAGCTTTTTGGTTGGCATGCATTTGAAAACATTGATCCAACAAATGATTTTGTGAATCTTTCTAGGAAAGTAATTACTTTATGTGAAGGGCTACCATTGATTCTTGAAGTTGTAGGCTCTCTTTTGCGTAATAAGACAAAATCGGAGTGGAAAAAAGTATTGAATAAATTAAAAAATGTTTCAAGTGAGTATGAGTTATGTTACTGA 1254 0.3971 MSSLASSSSEPKLTFEYDVFLTFNGLADGVRTFLEDCLRNAGFKTFIHDMVRDYSTWEMMERCRIVVVVITPDFVWSGKCLEILLNLMPGPKTVLPFFNGMSKNEARVQFESFHLRRYENEVSYYELNLHMRRFENELSVLLEILHLPRSNDDYIFDWDFQPRADAVCDSLHGFSLTDDFGDQELVNNLIAKAISQVGLLPRVRQVLDRLGWKSHHVENTIIVGIWGVGGVGKTTIARAIYDTIGIHFNCKSFLANIKDAWEKNNGQVLLQEQLLSDIHVNHMRQGPYRGALIVLDDVNQVGQLTELCGNGEQFGKGSLIFVTTRNKDLLDHFVDKSCKVEKLDDSESLQLFGWHAFENIDPTNDFVNLSRKVITLCEGLPLILEVVGSLLRNKTKSEWKKVLNKLKNVSSEYELCY 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00007 417 Gene3D - 179 341 IPR027417 -
Pral4707g00007 417 Gene3D - 342 416 IPR042197 -
Pral4707g00007 417 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 119 IPR035897 -
Pral4707g00007 417 Pfam NB-ARC domain 205 411 IPR002182 GO:0043531
Pral4707g00007 417 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 409 IPR044974 GO:0006952
Pral4707g00007 417 Gene3D - 1 130 IPR035897 -
Pral4707g00007 417 PRINTS Disease resistance protein signature 377 391 - -
Pral4707g00007 417 PRINTS Disease resistance protein signature 285 299 - -
Pral4707g00007 417 PRINTS Disease resistance protein signature 222 237 - -
Pral4707g00007 417 ProSiteProfiles TIR domain profile. 15 142 IPR000157 GO:0007165
Pral4707g00007 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 409 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00007 Pral-Chr4707 128293 132575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00007 58 413 WRKY Transcription Factor Family AT4G12020 24.021 3.64e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00007 - - pcin:129288830 266.159