Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00005 ATGTCTTCCTCGGCCTCTTCATCGTCTGAACCCAAATTGACCTTCCAATTCCACGTCCTCCTAACTTTATTCAATGGTATCGAAGATCCTGTAAGAATTATTTTCGAGAATGCTTTAAGGGACGCTGGGATGAGAACTTACTTTGCTGACTTCGTCGAGCATTCCATATGGAAGATGATAGAAAGATGCAGAATTGTGGTGGTGGTAATCACACCAGAATTCGTCAAGTCTTGCATATGCCTTGAGAGGCTGGGGGATATAATGTCGGCTCCCAAAACAGTGTTGCCTTTCTTCTATGGAGAGAGAAGCCATGAAGTGCGTGTGCGGTTCGAGAACTACTATTTTCCAATAATATTCGGTAAATCCATTTCCCCTAGGGATTCCCTACGAAGAGCCAGCGTTTTGTGTTCTTTGCGACATGGCTTCACATTGACACCTGATTTCGGTTCTCGGATTCGCAAAAACCCATATACAAAGAAACGGTTGAAAGCTAACGAGGGAGGTGGGATATCTCCCAGAACAACACACCCTGTTAGTGCAACGGTGCATGCTAGGTTTTCAGGGTTGCAACCTCGTGTGACAGAAGTGCTTCAACGATCGGGTTGGAAATACCATCATAAGGAAAATACAATCATAGTTGGAATTTGGGGGGTTGGAGGTATTGGTAAAACTACCATTGCCAGAACTATTTATGATACAATTGGTGGCCATTTTGATTACAAAAGTTTTCTTGCTAATATCAAGGGTAAATGGGAGGACGATGATAATTGTCAACTTCTGTCACTAGGTCAGCATCTAAACCATATGAAACAAGGACCTTATGAAAGAGCCTTAGTTGTAGTTGATGGTGTAAATCAAGCAGATGACCTCGATAAACTGTGTAGAAATAGACAGCAGTTTGGCAAAGGGAGTTTGATTTTGGTTACAGCAAGAGAAAAGTTACTTGAGAACTTTGTTGAAAAATCATATGAAATGAAAAGGCTGGACAACAATGAATCTCTTGAGCTTTTCAGTTGGCATGCATTTAAAAGCTGTGATCCAACAAATGATTTTGTGAATCTTTCTAGGAAACTAATTACTTTATGTGAAGGGCTACCATTGATTCTAGAACTTATAGGCTCTCTTTTGCACAATAGGACAAAATCGGAGTGGAGAAAAGTATTGAATAAATTAAAAGAAGTTCCAAAAGGCCATATACAACGTATGCTTAAAATAAGCGTAGACCTGTTGGCTGATGAAGAAAAGGAATTATTTTGTGATATAGCGCACTTTCATGTTGGCCAGAGCAAACATTATGTTACAGATTTGTTTAAGGGCTCAACATTCTCAATAGAAATGGGAATGCAAGTACTAATGGAGCGTAACCTTGTAAAGGTTGTCAATGACAAGATTCATGTGCATGATTTGCTACAAGAGATATGGAGGGGAATCACTACAGACAATAAGCCAAAGTTCACATGTTTCGATGTGTTCTTAAGCTTTAGGGGTGAGGATACGCGTAAATCATTTACTACTCATCTTTATTATGCTTTGAAACAGGCAGGAATTGAGGTTTTCATGGATGAAGAAGGGATTGAAAGGGGGGAAAACATTTCAAGTTCGTTACTAGGGGCAATTGAAAATTCTAGAATTTCAATCATTATATTCTCAAAAAATTATGCTGGCTCTAGTTGGTGCTTGCAAGAATTAGAGAAAATCATGGAGTGTTACAAAATTCATCAAGAGGTTTTCCCTATATTCTATGATGTGCAACCATCTGATGTTCGTAAACAACAAAATGCTTTTGGAAAAGCATGGGAAAGACTTATAACAAGACCCTCAAGTAGTGAAGATAAGAAATTGACAAACTATTTGAAGAGACTCCTTGCTGAGGCTGCCAGCTTATCAGGGTGGGACATGCAAAATTACAGAACTGAGACTGAGTTACTTGATGATGTTGTTAAAACTGTCACAATGAGGCTAGACAATAGCCGATACATGTTTGTTGCTCACCATCCAGTGGGTTTGGAGTCTCGAGTGCAAGATATCATCCAATTGCTAAGTAGTGAATCAAATGAGACCATCATAATAGGCATTTGGGGGATGGGAGGGATTGGCAAGACTACGGTGGCTAAAACCATTTACAATGAAATAGGCCAAAGTTTTGTGGGAAAGAGTTTCATTGCAAATATTAGGGAAGTATGGAAGCAAGATAATGGTCAAGTTTATTTGCAAGAACAACTTATTTCCAGCATCTTAAAAACAAGACGAATCAATCTACCAAATGCTGGGAGTGAAAAATCTCCAATCAAGGAAATTCTTTGTCAGAAAAGAGTATTTCTTGTATTAGATGATATCAGTAGTGAAAACCAGCTCAAAGTTTTATGCGGGAGTCGTGAATGGTTTGGCCAAGGAAGCAGAATAATTATTACAACAAGAGACGAACGTCTACTTCAGATCCTTCAAGCAGATAAAGTATTTAGTGCAAAGGAAATGGATGAGAATGAATCTATTGAGCTTTTCAGTTGGCATGCATTTAAGCAAGCACTTCCTGAAAGGAATTTCATTGAACTTTCAAGAAGGGTAGTATCATACTGTAGAGGGCTACCACTAGCACTTGAAATCCTTGGCTCATATTTGTTTGACAGGGAAATACCTTATTGGGAAAGTGCTTTGAATAAATTGAAACAAATTCCCAATGGTAAAATATATGAAATTTTAAAGATAAGTTATGATGGTCTGACTGATAAAACAGAGCAAGAGCTATTCCTAGACATATGTTGTTTTTTCATTGGAAAGGACAGAAGCTATGTGACTCGCGTATTAGATAGTTGTGGACTTCATGCAGAAATGGGAATCACCCATCTAATTGAGCGAAGCCTTGTAAAAGTGGTGAAGTTTGGAAACAAAAATGTACTTGATATGCATGACTTGCTACGTGATATGGGAAGAGAAATCATTCGTGAGCAATTTCCAGAGGAGCCAGAGAAACGTACTAGATTATGGTCTAATGATGACACATTGAATGTGTTAGAAAATAAGATTGGAACAGTAGCTACTAAGGGATTGTCATTAAGCATGCCAAGAAACAATTCAGTATCATTGAGTACTGGTGCATTTAAGAAGATGGAGAGGCTTCGTTTACTCAACTTTGATCATGTACAGCTTAATGGAGAATATGGTTATCTATCAAAAGAATTGAGATGGCTTTGTTGGCGTAGATTTCTTTTAGAGAGCTTGCCAACAAACTTCAATCTAAAAAGGATAGTTGCCATTGATTTAAAGTGGAGTAAACTAACAAAAGTATGGGAGAAAAGCCAGGTGCTGGAATGGTTGAAAATTCTCAATCTGAGTCATTCTCACTACCTAACAGAAACACCGGACTTTTCAAAATTACCGTATCTTGAGAAGTTGATACTTAAAGATTGTCTTGGTTTGTCTGTGATTCACCCTTCTATTGGAAATCTTAGACATCTTATCATGCTAAATTTGAAAAACTGTAATGGCTTGGAGCATCTTCCAAGGAGTATATATGACTTGAAATCTTTGAAAACTTTCAATCTTTTTGGTTGTTCCAAGATTGAAAGGATTGTCACGAGATATATTTCCATCTCTTATGTTGACATGGTTGCCCCCAACAAATCATTCAAGGTCCTCATTTCGAGTATTTGGGATCATGCCATCATTAATCAAGATTCTTTCACAACCTTTGTTCGCCAAAAGTTGTGA 3708 0.3808 MSSSASSSSEPKLTFQFHVLLTLFNGIEDPVRIIFENALRDAGMRTYFADFVEHSIWKMIERCRIVVVVITPEFVKSCICLERLGDIMSAPKTVLPFFYGERSHEVRVRFENYYFPIIFGKSISPRDSLRRASVLCSLRHGFTLTPDFGSRIRKNPYTKKRLKANEGGGISPRTTHPVSATVHARFSGLQPRVTEVLQRSGWKYHHKENTIIVGIWGVGGIGKTTIARTIYDTIGGHFDYKSFLANIKGKWEDDDNCQLLSLGQHLNHMKQGPYERALVVVDGVNQADDLDKLCRNRQQFGKGSLILVTAREKLLENFVEKSYEMKRLDNNESLELFSWHAFKSCDPTNDFVNLSRKLITLCEGLPLILELIGSLLHNRTKSEWRKVLNKLKEVPKGHIQRMLKISVDLLADEEKELFCDIAHFHVGQSKHYVTDLFKGSTFSIEMGMQVLMERNLVKVVNDKIHVHDLLQEIWRGITTDNKPKFTCFDVFLSFRGEDTRKSFTTHLYYALKQAGIEVFMDEEGIERGENISSSLLGAIENSRISIIIFSKNYAGSSWCLQELEKIMECYKIHQEVFPIFYDVQPSDVRKQQNAFGKAWERLITRPSSSEDKKLTNYLKRLLAEAASLSGWDMQNYRTETELLDDVVKTVTMRLDNSRYMFVAHHPVGLESRVQDIIQLLSSESNETIIIGIWGMGGIGKTTVAKTIYNEIGQSFVGKSFIANIREVWKQDNGQVYLQEQLISSILKTRRINLPNAGSEKSPIKEILCQKRVFLVLDDISSENQLKVLCGSREWFGQGSRIIITTRDERLLQILQADKVFSAKEMDENESIELFSWHAFKQALPERNFIELSRRVVSYCRGLPLALEILGSYLFDREIPYWESALNKLKQIPNGKIYEILKISYDGLTDKTEQELFLDICCFFIGKDRSYVTRVLDSCGLHAEMGITHLIERSLVKVVKFGNKNVLDMHDLLRDMGREIIREQFPEEPEKRTRLWSNDDTLNVLENKIGTVATKGLSLSMPRNNSVSLSTGAFKKMERLRLLNFDHVQLNGEYGYLSKELRWLCWRRFLLESLPTNFNLKRIVAIDLKWSKLTKVWEKSQVLEWLKILNLSHSHYLTETPDFSKLPYLEKLILKDCLGLSVIHPSIGNLRHLIMLNLKNCNGLEHLPRSIYDLKSLKTFNLFGCSKIERIVTRYISISYVDMVAPNKSFKVLISSIWDHAIINQDSFTTFVRQKL 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00005 1235 Gene3D - 486 657 IPR035897 -
Pral4707g00005 1235 Gene3D - 328 414 IPR042197 -
Pral4707g00005 1235 Gene3D - 824 908 IPR042197 -
Pral4707g00005 1235 Gene3D Ribonuclease Inhibitor 980 1199 IPR032675 -
Pral4707g00005 1235 Gene3D - 35 166 IPR035897 -
Pral4707g00005 1235 SMART till_3 487 628 IPR000157 GO:0007165
Pral4707g00005 1235 Pfam TIR domain 488 650 IPR000157 GO:0007165
Pral4707g00005 1235 FunFam Disease resistance protein (TIR-NBS-LRR class) 485 656 - -
Pral4707g00005 1235 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 109 IPR035897 -
Pral4707g00005 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 421 IPR027417 -
Pral4707g00005 1235 ProSiteProfiles TIR domain profile. 486 654 IPR000157 GO:0007165
Pral4707g00005 1235 PRINTS Disease resistance protein signature 859 873 - -
Pral4707g00005 1235 PRINTS Disease resistance protein signature 689 704 - -
Pral4707g00005 1235 PRINTS Disease resistance protein signature 766 780 - -
Pral4707g00005 1235 PRINTS Disease resistance protein signature 1147 1163 - -
Pral4707g00005 1235 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 489 1193 IPR044974 GO:0006952
Pral4707g00005 1235 Pfam NB-ARC domain 209 400 IPR002182 GO:0043531
Pral4707g00005 1235 Pfam NB-ARC domain 670 904 IPR002182 GO:0043531
Pral4707g00005 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 658 919 IPR027417 -
Pral4707g00005 1235 SUPERFAMILY "Winged helix" DNA-binding domain 895 1004 IPR036390 -
Pral4707g00005 1235 Gene3D - 658 821 IPR027417 -
Pral4707g00005 1235 SMART AAA_5 686 824 IPR003593 GO:0016887
Pral4707g00005 1235 SMART AAA_5 209 329 IPR003593 GO:0016887
Pral4707g00005 1235 SUPERFAMILY L domain-like 981 1189 - -
Pral4707g00005 1235 Gene3D - 190 325 IPR027417 -
Pral4707g00005 1235 SUPERFAMILY Toll/Interleukin receptor TIR domain 486 631 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00005 Pral-Chr4707 73832 84572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00005 213 459 WRKY Transcription Factor Family AT4G12020 27.820 2.69e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00005 - - pcin:129288830 1363.21