Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00004 ATGTCTGAAACCGACCTCTCTCCCATATCTCACGTGATCTCACGTGTCACCACACCTTCTTCCCCGAAGGTTCCATCTTCAAACAATGTCACGAAGGTTAAACTCAGAAGAAAAACCAATGATCTTGATGGAGCATATGATCACGAGATATCGTCTTCGGCCAGTCCTTATTACAAGGGCCTCCTTTATCAACCTATCGTTATCGACGACGAATATATTTCGCCGAATCATCATCATCATCAGAACCATGATCTGAACAGTGGCCATAGTAATTCTGGGGTTCCGGCGACTTCTGGATCTAGTCCATACTACAAAGGGCTTACAGATTTTTCACTGGTTATTCATGGAGGACGGCACCTACAATCGCATGATGATTATGGCTATGGAATTCATGAGGTTGAAGCAGCGTACGAGTGTAATCCTTATTTCAGAGGCCTCCTCACTGATAGCTCTCTGGCTATGGCGATTCGTAAACCTGACGGAGGAGGAGGAGGAGCATCGTGTGGGCATGGTGGTGTTATGCTACCTTTTGGGTTCAGCATGAATTTATGCTTAGGCGGTAAGGATGATATTTTGAACGACATCACAGCTCAGATGGAGTCGGAAAGGCAGCGTACTTTATCGTCGTTATCGCCACCGGCGCCCATACCGTTAACGCAGCCTTCGTTACCACTATCAGCACCGCCCCCGTCTGTGATTCCATCCAAAGGGACGACTTCTTTAAGTACGGAGCTGAAAGTAGAAGATGGGAAGCCTATGGGCGGAGGAGAATCAGAAGAAACTGCCCATGAGGAAAAAGCTGTGGATATTAAGAATAATAAGGAGGAGGCCATGAATGAATCTGGTTTACCAAATGAGGAGGTAATAAAGAAGAAGAAGTCCTTGAGAGAGAGTGTTTCCAATATTTCTGAACAAACAGCGTCTGCATCATCATCATCATCAGAATCTGAATCTTCAAGTAATAAAGATGTTCCCCAGGAGATTAAAGTAGAAGAAGAAGAAGAAGGAAGCTTGAAAGAATATGTGTGGGCTAACAAGTATCAACCCAAGGCATTGCAACAATTTATCTGCCACAAACAGATTGTTTCTCAGCTATTAACGATGGTAAAAGAGGGATCTTCTTGTGACCATTTTATTTTTGAAGGACCACCTGGTGTAGGAAAAAGAACCATGATACGAGCTCTACTTCGAGAGGTCTTTGGCAACGACGTTGTTAAGGTGACTGAGGAATATAGAACAGTTTTATTAAAGGGAGAGGTGATAGGAAGCATCCAAGTGCCAATAATAAAATCAGGACATCATATGGAAGTCAATATCTCGCAAACAAAAGGCTATGAAGAGCATGTGGTTGCTTATTTATTACGAGAAACTTACGACAAGACCATCAACACTTCAATGCCTTGCGTGCCAGAAAACTGCCAAGCCCTAATAATATACGAGGCAGAGACACTATCAACAGAATCGTTGTTGTACATAAAGTGGATGATTGGAAGATATAATAAAGGTTGCAATAAAGTCTTCTTTTGCTGCTCTGATGGATCCAAGCTCCAAACTCTCAAACCTCTCTGCAAAACCTTTCGTCTTTCTCCTCCTTCCACTCAAGAGATTGTTGAGGTTTTGAAATACATAGGGAAAGAAGAAAGGAAAGAATTGCCCCTTGAATTCCTTACCAAGGTTGTTGAGAAGTCAAAGAACAATCTTCGTCAGGCCATTCGTTCTTTGGAGGCCACTTGCCAGAACAAGGATTCAATCAAAGATGACGAGCTAATTTTAACAGGATGGGAAGATGACATCTCAAATATTGCTAAGAGTATACTTAAAGAGCAAAGTCCAAAACAGCTATACATGATTCATGTGAAGCTCGAAAGTCTCATGATTCACAAGGTTTCACCTGACTTTGTTTACAAGTACTTGGTATCAGAGCTAAAATCTCTGGTGGATGAATCACTAAGACCAGGGCTTGAAAAACTCAAGAAGGAGTACAAACATAATGCTTATGGAATGAAGATGAGAAGTGGGAAGCATTCTGGTCATGCTCACAACAAAGTAAGGGAATCTGATGAAAGGAACAATGCAACACTCAAGAAGAATGCTCGCACTTACTTGGAAGTTGAAGAATTCATAGCAAAATTCATGAGCTGGTACAAGAATTCTGCTGCAAAAAGTGACAATGCGTAA 2178 0.4206 MSETDLSPISHVISRVTTPSSPKVPSSNNVTKVKLRRKTNDLDGAYDHEISSSASPYYKGLLYQPIVIDDEYISPNHHHHQNHDLNSGHSNSGVPATSGSSPYYKGLTDFSLVIHGGRHLQSHDDYGYGIHEVEAAYECNPYFRGLLTDSSLAMAIRKPDGGGGGASCGHGGVMLPFGFSMNLCLGGKDDILNDITAQMESERQRTLSSLSPPAPIPLTQPSLPLSAPPPSVIPSKGTTSLSTELKVEDGKPMGGGESEETAHEEKAVDIKNNKEEAMNESGLPNEEVIKKKKSLRESVSNISEQTASASSSSSESESSSNKDVPQEIKVEEEEEGSLKEYVWANKYQPKALQQFICHKQIVSQLLTMVKEGSSCDHFIFEGPPGVGKRTMIRALLREVFGNDVVKVTEEYRTVLLKGEVIGSIQVPIIKSGHHMEVNISQTKGYEEHVVAYLLRETYDKTINTSMPCVPENCQALIIYEAETLSTESLLYIKWMIGRYNKGCNKVFFCCSDGSKLQTLKPLCKTFRLSPPSTQEIVEVLKYIGKEERKELPLEFLTKVVEKSKNNLRQAIRSLEATCQNKDSIKDDELILTGWEDDISNIAKSILKEQSPKQLYMIHVKLESLMIHKVSPDFVYKYLVSELKSLVDESLRPGLEKLKKEYKHNAYGMKMRSGKHSGHAHNKVRESDERNNATLKKNARTYLEVEEFIAKFMSWYKNSAAKSDNA 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00004 725 MobiDBLite consensus disorder prediction 250 276 - -
Pral4707g00004 725 MobiDBLite consensus disorder prediction 74 98 - -
Pral4707g00004 725 Gene3D - 341 531 IPR027417 -
Pral4707g00004 725 Gene3D - 593 715 - -
Pral4707g00004 725 SUPERFAMILY post-AAA+ oligomerization domain-like 593 664 IPR008921 GO:0003677|GO:0006260
Pral4707g00004 725 Gene3D - 532 592 - -
Pral4707g00004 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 587 IPR027417 -
Pral4707g00004 725 Coils Coil 553 573 - -
Pral4707g00004 725 MobiDBLite consensus disorder prediction 199 332 - -
Pral4707g00004 725 MobiDBLite consensus disorder prediction 214 231 - -
Pral4707g00004 725 MobiDBLite consensus disorder prediction 670 691 - -
Pral4707g00004 725 Coils Coil 260 280 - -
Pral4707g00004 725 CDD HLD_clamp_RFC 531 602 - -
Pral4707g00004 725 FunFam replication factor C subunit 3 532 590 - -
Pral4707g00004 725 Coils Coil 285 305 - -
Pral4707g00004 725 MobiDBLite consensus disorder prediction 299 321 - -
Pral4707g00004 725 MobiDBLite consensus disorder prediction 199 213 - -
Pral4707g00004 725 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 343 649 - -
Pral4707g00004 725 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00004 Pral-Chr4707 32199 39003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00004 342 717 Core DNA Replication Machinery Family AT5G27740 29.921 3.15e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00004 K10756 - gmx:102664389 518.85