Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4705g00001 ATGGCGGCCACTCGAGTGGCTTCTTCTCTTTTTCTTCCAATCGCTCTGATCTTTTCTGCTCTTCATCCTGCTTTAGCCAACACTGACGCTACTGATGTTCAAGCGCTTGAGGTTTTGTACAACGCTTTAAACAGCCCTCCTTGGCTAACTGGCTGGAAAATTGGTGGTGGTGATCCTTGTGTAGAGTCATGGAAAGGGATAACATGTGAGGGCTCAGCCGTTGTTTCCATAGAATTGTCAGGTTTGGGACTCAATGGGACTCTGGGATACCTGCTTTCGGACCTTATGTCGCTGAGACAACTTGACTTAAGTGACAACAAGATCCACGACACAGTCCCTTACCAGTTGCCACCAAATCTGACAAGCCTGAACCTCGCAAGAAATAACTTGAGCGGAAATCTTCCTTATTCCATTTCTGCCATGAGTTCCCTCAATTATTTGAACGTGAGCCACAATGCACTCTCCCTTTCAATTGGAGACATTTTTGCCGACCTTGCTGATCTCGGTACCCTGGATCTATCGTTCAATGACTTTTCTGGAGATCTTCCTCCCTCATTCGGTTCATTGTCCAATCTTTCTTCTGTCTTTTTGCAGAACAATCAGTTGACCGGTTCTCTTAATGTTCTTGTTGGTTTGCCTTTAGATACTTTAAATGTTGCGAACAACAATTTCACTGGATGGATACCTCAGGAACTTAGTTCAATTCATAATTTTATATCTGATGGGAACTCCTTTGACAATGGCCCTGCTCCTCCTCCTCCTCCACATTCAGCCTCTTCTCCCAGAAGATCTCCTACTAGCCATCACCATTCTGGCTCTGGTTCTCACAAAGCACATGCTTCTGAATCTGATGATGAAGATGCTGATAGCCACAAGGGTTTATCATCTGGGGTTATTATAGGCATTATTTTGGGTTCAGTTTTTCTAGCTGTTGTTGTGCTACTTGCTCTTGCTTTATGTATCCGAAAGCATAAAAAGAAGGAAAAAGGTGTGAGAACATCCAATGGGACTCCTCCTCTTGGAACCAATAATGTAACTCCTCCAATGCAAGAACAGAGGGTAAAGAGTGCTGCTGTTATTACAGACCTGAAACCTCCTCCTGCAGAAAAAGTGATAGCTGAGAGGGTTCCTTCGAAAAATGGATCTGCTAAGCGGATAAAATCCCCTATAACTGCTACATCATACACAATTGCTACTCTTCAAAGTGCAACAAATAGCTTCAGCCAGGAATTTATTATCGGTGAAGGTTCTCTTGGTCGAGTTTACAGGGCTGAATTCCCTAATGGGAAGATCATGGCCATTAAAAAGATCGACAATGCGGCACTGTCATTACAGGAGGAAGACAACTTTCTTGAAGCTGTATCAAATATGTCACGCCTGCGGCATCCAAACATTGTTACACTGGCTGGGTACTGTGCAGAGCATGGGCAGCGTCTTCTAGTTTACGAGCATATTGGTAATGGAAATCTACATGACATACTCCATTTTGCTGAAGATAGCAGCAAGGCTTTATCTTGGAATGCCCGTGTTCGAATAGCACTGGGCACTGCCCGAGCATTAGAATACTTGCATGAAGTATGCTTGCCTTCTGTTGTACATAGAAACTTTAAATCGGCAAACATATTACTCGATGAGGAGTTGAATCCTCAACTGTCTGATTGTGGTTTAGCTGCTTTAACGCCAAACACTGAACGGCAGGTTTCAACTCAGATGGTTGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCAGGAATTTACACAGTGAAAAGTGATGTTTACAGTTTTGGAGTGGTAATGTTAGAGCTATTGACGGGTCGGAAGCCACTTGACAGTTCACGAGCGAGATCAGAGCAGTCGCTTGTGAGGTGGGCTACTCCCCAACTTCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCTTTGAATGGCATGTATCCGGCGAAGTCACTGTCACGCTTTGCCGATATCATTGCCCTTTGTGTTCAGCCGGAGCCTGAATTCCGACCTCCCATGTCTGAGGTTGTGCAAGCACTGGTCCGGCTAGTGCAAAGAGCAAGTGTGGTCAAACGCCGCCCCAGTGACGAATCTGGGTTTGGTCACAAGACCCCAGATCATGAATCCTTTGACATGTCATTTTAA 2148 0.4469 MAATRVASSLFLPIALIFSALHPALANTDATDVQALEVLYNALNSPPWLTGWKIGGGDPCVESWKGITCEGSAVVSIELSGLGLNGTLGYLLSDLMSLRQLDLSDNKIHDTVPYQLPPNLTSLNLARNNLSGNLPYSISAMSSLNYLNVSHNALSLSIGDIFADLADLGTLDLSFNDFSGDLPPSFGSLSNLSSVFLQNNQLTGSLNVLVGLPLDTLNVANNNFTGWIPQELSSIHNFISDGNSFDNGPAPPPPPHSASSPRRSPTSHHHSGSGSHKAHASESDDEDADSHKGLSSGVIIGIILGSVFLAVVVLLALALCIRKHKKKEKGVRTSNGTPPLGTNNVTPPMQEQRVKSAAVITDLKPPPAEKVIAERVPSKNGSAKRIKSPITATSYTIATLQSATNSFSQEFIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEHIGNGNLHDILHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPQLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGHKTPDHESFDMSF 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4705g00001 715 SUPERFAMILY L domain-like 30 237 - -
Pral4705g00001 715 MobiDBLite consensus disorder prediction 695 715 - -
Pral4705g00001 715 SUPERFAMILY Protein kinase-like (PK-like) 386 681 IPR011009 -
Pral4705g00001 715 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 685 IPR046959 -
Pral4705g00001 715 MobiDBLite consensus disorder prediction 243 291 - -
Pral4705g00001 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 485 695 - -
Pral4705g00001 715 ProSiteProfiles Leucine-rich repeat profile. 97 118 IPR001611 GO:0005515
Pral4705g00001 715 Gene3D Transferase(Phosphotransferase) domain 1 485 701 - -
Pral4705g00001 715 MobiDBLite consensus disorder prediction 275 291 - -
Pral4705g00001 715 Pfam Protein kinase domain 410 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4705g00001 715 MobiDBLite consensus disorder prediction 326 347 - -
Pral4705g00001 715 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Pral4705g00001 715 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Pral4705g00001 715 Gene3D Phosphorylase Kinase; domain 1 369 484 - -
Pral4705g00001 715 ProSiteProfiles Protein kinase domain profile. 407 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4705g00001 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 256 - -
Pral4705g00001 715 CDD STKc_IRAK 413 684 - -
Pral4705g00001 715 Gene3D Ribonuclease Inhibitor 29 252 IPR032675 -
Pral4705g00001 715 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 373 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4705g00001 Pral-Chr4705 131 5782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4705g00001 141 715 Strubbelig Receptor Gene Family AT4G22130 72.491 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral4705g00001 Pkinase 7.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4705g00001 - - aprc:113869285 1123.23