Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4701g00022 ATGTCTTGCTCCAATCTGACAATGTGGGTTTCTTCGAAACCTTCTTTATCCGATGCTTCTTCCCTCTCCTTCCGTGCATCCCTTAACCCCTTTTTCCACCCTCCTTCTCAGAACCCATCTCCTTCGCGATCCTCTGCGACGCAAATCCAGTGTGGTCTCCGTGAGCTCAGAGATCGAATTGATTCTGTGAAGAACACCCAGAAAATCACAGAGGCCATGAAGCTCGTCGCCGCCGCGAAAGTCAGAAGAGCTCAAGAAGCTGTCGTTAATGGCAGACCTTTCTCTGAGACCCTTGTCGAAGTCCTTTACAATATCAACGAGCAGCTTCAAACCGAAGATGTTGATGTTCCTCTGACAAAAGTTCGACCTGTTAAGAAGGTGGCTTTGGTTGTTTGTACTGGAGATCGAGGTCTCTGTGGGGGTTTCAATAACCAAATCCTTAAAAAGGCTGAAGCAAGAATCGCAGAATTGAAGGGTCTGGGTGTTGATTATACTGTCATTAGCGTTGGGAAAAAGGGTAATTCGTATTTTATTCGTAGGCCTTATATCCCAGTGGATAGATTTCTCGAACAAGGAACTCTGCCAACTGCAAAAGAAGCTCAAGCCATTGCTGATGACGTTTTCTCTTTATTTGTGAGTGAAGAGGTTGACAAGGTTGAGTTATTATACACAAAGTTTGTGTCTTTAGTGAAATCCGATCCTGTGATTCATACTCTACTTCCTCTGTCACCAAGAGGAGAGATCTGTGATGTGAATGGTAACTGTGTGGATGCTGCTGAGGACGAGTTCTTTAGGTTGACTACAAAGGAAGGGAAGTTGACTGTTGAGAGAGATGTTTTGAGGACCAAGACAGACGATTTCTCTCCCATTTTGCAGTTTGAGCAGGACCCAGTTCAGATTCTTGATGCCTTATTGCCTCTGTACTTGAATTCTCAGATTCTTAGAGCACTGCAGGAGTCATTAGCCAGTGAGCTAGCTGCTAGAATGAGTGCTATGAGCAATGCTACTGATAACGCCGTGGAATTGAAGAGGAACTTGTCAAGGGTATACAACAGGCAACGTCAAGCCAAGATCACAGGTGAAATTCTGGAAATTGTTGCTGGTGCCAATGCCCTAACATAG 1122 0.4492 MSCSNLTMWVSSKPSLSDASSLSFRASLNPFFHPPSQNPSPSRSSATQIQCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVCTGDRGLCGGFNNQILKKAEARIAELKGLGVDYTVISVGKKGNSYFIRRPYIPVDRFLEQGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGNCVDAAEDEFFRLTTKEGKLTVERDVLRTKTDDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELKRNLSRVYNRQRQAKITGEILEIVAGANALT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4701g00022 373 FunFam ATP synthase gamma chain, chloroplastic 120 243 - -
Pral4701g00022 373 Pfam ATP synthase 53 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 52 372 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 Hamap ATP synthase gamma chain [atpG]. 50 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 Gene3D - 119 243 - -
Pral4701g00022 373 PRINTS ATP synthase gamma subunit signature 319 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 PRINTS ATP synthase gamma subunit signature 124 143 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 PRINTS ATP synthase gamma subunit signature 350 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 PRINTS ATP synthase gamma subunit signature 217 234 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 Coils Coil 332 352 - -
Pral4701g00022 373 CDD F1-ATPase_gamma 53 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 52 118 - -
Pral4701g00022 373 PANTHER ATP SYNTHASE GAMMA CHAIN 5 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 FunFam ATP synthase gamma chain, chloroplastic 269 372 - -
Pral4701g00022 373 NCBIfam ATP synthase F1 subunit gamma 52 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4701g00022 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 272 372 - -
Pral4701g00022 373 FunFam ATP synthase gamma chain, chloroplastic 51 118 - -
Pral4701g00022 373 ProSitePatterns ATP synthase gamma subunit signature. 358 371 IPR023632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4701g00022 Pral-Chr4701 293278 294923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4701g00022 24 372 Primary Pumps ATPases AT1G15700 70.787 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4701g00022 K02115 - csv:101214408 623.239