Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4701g00021 ATGGAGGTGAAGAACATGAGCAGCTCAAACCATACAGGCGAAATTGCCAATGGCCGTATTGGCAAAGAGACAAGAGCTGAGGAGGACGCTCATCAGCAGCGGGGATTCTCAGAAGATGAGGAAGAACTCGTTGCTAGAATGTTCAGATTGGTTGGCAAAAGGTGGTCTTTGATTGCTGGGAGAATTCCTGGAAGAACTGCGCAAGAGATAGAGAAATACTGGAATTCAAAGTGCCCTTCATGA 243 0.4691 MEVKNMSSSNHTGEIANGRIGKETRAEEDAHQQRGFSEDEEELVARMFRLVGKRWSLIAGRIPGRTAQEIEKYWNSKCPS 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4701g00021 80 MobiDBLite consensus disorder prediction 1 15 - -
Pral4701g00021 80 FunFam MYB-like transcription factor 35 77 - -
Pral4701g00021 80 MobiDBLite consensus disorder prediction 1 38 - -
Pral4701g00021 80 CDD SANT 36 75 IPR001005 -
Pral4701g00021 80 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 80 IPR017930 -
Pral4701g00021 80 MobiDBLite consensus disorder prediction 18 38 - -
Pral4701g00021 80 SMART sant 32 80 IPR001005 -
Pral4701g00021 80 ProSiteProfiles Myb-like domain profile. 28 78 IPR001005 -
Pral4701g00021 80 SUPERFAMILY Homeodomain-like 34 76 IPR009057 -
Pral4701g00021 80 Pfam Myb-like DNA-binding domain 36 75 IPR001005 -
Pral4701g00021 80 Gene3D - 35 78 - -
Pral4701g00021 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 30 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4701g00021 Pral-Chr4701 287184 288761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4701g00021 35 76 MYB Transcription Factor Family AT3G13540 64.286 1.08e-14 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4701g00021 Myb_DNA-binding 2.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4701g00021 - - adu:107482590 95.5153