Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00081 ATGCAAATGCTGGATCATCCAAATGTTGTTGCCCTTAGGCATTATTTCTTTTCGACGACTGACAAAGAAGAGCTTTACTTGAATCTTGTGCTTGAATACGTTCCTGAAACTGTTAATCGTGTTGCAAGGAATTATAGCAGGATCAACCAGCGAATGCCTTTAATATATGTTAAGCTTTACACCTACCAGATTTGCAGGGCTCTTGCATACATACATAATTGCATTGGAATTTGCCATCGTGACATCAAACCTCAGAATCTACTTGTGAATCCACATACGCATCAGCTGAAAATTTGTGATTTTGGAAGTGCTAAAGTGTTGGTGAAAGGAGAGCCAAATGTTTCTTATATCTGTTCGAGATATTATCGTGCTCCAGAACTTATTTTTGGTGCCACTGAGTATACAACTGCTATAGATATATGGTCAACTGGATGTGTAATGACTGAATTACTTCTTGGACAGCCTCTGTTTCCTGGAGAAAGTGGAGTTGACCAACTTGTTGAAATCATTAAGGTTTTGGGAACTCCAACAAGGGAAGAGATAAAATGCATGAACCCAAATTATACTGAATTTAAGTTTCCACAGATTAAACCTCATCCATGGCACAAGGTCTTTCAGAAGCGGTTACCCCCTGAAGCAGTTGACCTTGTGTGTAGGTTCTTTCAGTATTCTCCCAATTTGCGATGCACTGCTTTGGAAGCTTGCATTCATCCTTTCTTTGATGAATTGAGGGATCCAAATACCCGCCTTCCTAATGGCCGCCCACTTCCTCCTCTTTTTAATTTTAAAGCTGCAGAGCTCTCCGGTATCCCGCAAGATGTCATCAATCGGCTTATTCCAGAGCATGCTCGTAGGCAGAACTTATTTATGGCTTTGCACACCTAG 885 0.409 MQMLDHPNVVALRHYFFSTTDKEELYLNLVLEYVPETVNRVARNYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMTELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKAAELSGIPQDVINRLIPEHARRQNLFMALHT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00081 294 FunFam Shaggy-related protein kinase kappa 36 284 - -
Pral4691g00081 294 SMART serkin_6 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4691g00081 294 CDD STKc_GSK3 1 243 IPR039192 -
Pral4691g00081 294 Gene3D Transferase(Phosphotransferase) domain 1 36 284 - -
Pral4691g00081 294 Pfam Protein kinase domain 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4691g00081 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Pral4691g00081 294 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4691g00081 294 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 286 - -
Pral4691g00081 294 SUPERFAMILY Protein kinase-like (PK-like) 1 266 IPR011009 -
Pral4691g00081 294 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00081 Pral-Chr4691 955432 961315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00081 7 248 Core Cell Cycle Gene Families AT1G76540 36.032 3.90e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pral4691g00081 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00081 K03083 - qsa:O6P43_031473 595.119