Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00070 ATGGGAAGGAAAAAGACAGAGGAAGCCGGCGCTGCTGCAAAGGCTAAGAAAGAAAAGTTCTCTGTCTCTGCCATGCTTGCTAGTATGGATGAAAAACCTGATAAACCCAAGAAAGCATCTTCATCCAGTAAGCCCAAGGCAAAATCTGCTCCAAAAGTTTCTACATACACCGATGGTATTGATCTTCCTCCCTCTGATGATGAAGAAGATGATGTCATGGAAGAGGAGGAAGAACAAGATAGTGCACCTAAGCGGTCCACTCAGCAGCAAAGGCCTGACTTAAAGCCTCTTGAGGTGTCTGTCACTGACAAAGAGGTAAAAAAGCGGGAAAAGAAGGATCTTCTAGCTGCTCATGCTGCAGAGTTGGCGAAACAGGAAGCACTTAGGGATGACCGTGATGCTTTTACTGTGGTCATTGGAAGCCGGACTTCAGTGCTTGATGGAGAAAATGACACTGATGCCAATGTGAAGGATGTGACAATAGAGAACTTTTCTGTGTCAGCTCGGGGTAAAGAACTCCTTAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTAGTTGGGCCCAATGGAAAGGGTAAGTCCACACTGTTGAAGCTCCTTGCCTGGAGGAAGATACCAGTGCCAAAGAATATTGATGTGCTTCTGGTTGAGCAGGAGGTTGTTGGTGATGATAAAACGGCGCTTGAAGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAAACCCGACAAGAAGTGGCTCTTCTTCAAAATGCAAGTTCTGTTGATGAAAGTGGAGACAAGGATGATGGTTATGAAGATGATGCAGGAGAGAAGCTTGCTGAGCTGTATGAGAAGTTACAGTTGATGGGATCTGATGCAGCTGAAGCTCAGGCATCAAAGATTCTAGCAGGATTAGGTTTTACAAAGGATATGCAGGCCCGCGCTACAAAATCATTTAGTGGGGGTTGGAGGATGAGAATTTCTTTAGCCAGAGCGCTTTTTGTTCAGCCAACTCTATTATTGCTTGATGAACCAACAAATCATCTTGACCTGAGAGCTGTTCTCTGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTCGTTTCACATGATAGGGATTTCCTAAATACAGTTTGTAATGAGATTATTCATCTGCATGATCTGAAACTTTATATCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAGCGCCGCAAAGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAAATGAAAGCAGCCAAAAGAAGTGGAAATCGGGTTCAGCAGGAAAAGGTGAAGGATCGAGCTAAGTTTGCAGCTGCTAAGGAAGCAGCAAAAAGCAAGGGTAAAGGCAAGGGCAAGGTTGATGAGGATGATACCCCAGCAGATGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTTCACTTCCCTGAACCTACTGAACTAACACCTCCTTTGCTGCAGCTCATTGAAGTGAGCTTCAGCTATCCAAAGCGGCCAGATTTCAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACTCGTGTCGCCATTGTTGGGCCTAATGGAGCGGGAATGCTGAATCTTCTTGCGGGTGACTTGTCTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATCGGAAGATATTCCCAGCACTTTGTGGACCTCCTAACAATGGATGAAACACCTGTCCAGTATCTTCTTCGTCTTCATCCAGATCAGGAAGGACTCAGTAAGCAGGAGGCTGTTCGAGCAAAACTTGGCAAGTTTGGATTGCCTAGTCATAATCATCTTACCCCTATTGTCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTATTCACCTCAATATCCATGTCAAAGCCCCACATTTTGCTGTTGGATGAACCTACTAATCATCTAGACATGCAAAGTATTGATGCGTTAGCTGATGCATTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCGCGTGTATGTGATGATGAAGAGAGGAGTCAAATATGGGTAGTTGAGGATGGTACCGTCAAATTCTTTGATGGAACTTTTGAGGATTACAAGGACGAATTGCTGAGAGAAATTAAAGCTGAAGTCGATGATTGA 2154 0.4392 MGRKKTEEAGAAAKAKKEKFSVSAMLASMDEKPDKPKKASSSSKPKAKSAPKVSTYTDGIDLPPSDDEEDDVMEEEEEQDSAPKRSTQQQRPDLKPLEVSVTDKEVKKREKKDLLAAHAAELAKQEALRDDRDAFTVVIGSRTSVLDGENDTDANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKTRQEVALLQNASSVDESGDKDDGYEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQARATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLYIYRGNFDDFESGYEQRRKEMNKKFEIYDKQMKAAKRSGNRVQQEKVKDRAKFAAAKEAAKSKGKGKGKVDEDDTPADVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPKRPDFRLSNVDVGIDMGTRVAIVGPNGAGMLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVKFFDGTFEDYKDELLREIKAEVDD 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00070 717 CDD ABCF_EF-3 493 692 - -
Pral4691g00070 717 Gene3D - 156 442 IPR027417 -
Pral4691g00070 717 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 131 710 - -
Pral4691g00070 717 MobiDBLite consensus disorder prediction 1 15 - -
Pral4691g00070 717 FunFam ABC transporter F family member 4 458 717 - -
Pral4691g00070 717 ProSitePatterns ABC transporters family signature. 316 330 IPR017871 GO:0005524|GO:0016887
Pral4691g00070 717 MobiDBLite consensus disorder prediction 1 105 - -
Pral4691g00070 717 Gene3D - 460 716 IPR027417 -
Pral4691g00070 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 159 419 IPR003439 GO:0005524
Pral4691g00070 717 Coils Coil 235 255 - -
Pral4691g00070 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 407 IPR027417 -
Pral4691g00070 717 CDD ABCF_EF-3 159 389 - -
Pral4691g00070 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 493 715 IPR003439 GO:0005524
Pral4691g00070 717 MobiDBLite consensus disorder prediction 62 77 - -
Pral4691g00070 717 FunFam ABC transporter F family member 4 157 440 - -
Pral4691g00070 717 MobiDBLite consensus disorder prediction 445 468 - -
Pral4691g00070 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 705 IPR027417 -
Pral4691g00070 717 Coils Coil 408 428 - -
Pral4691g00070 717 SMART AAA_5 519 692 IPR003593 GO:0016887
Pral4691g00070 717 SMART AAA_5 183 388 IPR003593 GO:0016887
Pral4691g00070 717 Pfam ABC transporter 174 344 IPR003439 GO:0005524
Pral4691g00070 717 Pfam ABC transporter 510 642 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00070 Pral-Chr4691 878304 883370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00070 493 693 Calmodulin-binding Proteins AT2G36910 27.803 7.80e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00070 K06184 - qsa:O6P43_012151 1127.85