Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00054 ATGCCCTTGCTTACGATCCTAGACTTATCTTACACTAGTGTGCGTGAACTACCAGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAAATGTATTTGAAAGGTTGTGAATGTTTCATGAAATTGTCACCAAAAATTGGAAAATTGAAGAAACTTGAGAAGCTCGATCTTGACGGAACTGAGATCATACATCTGCCAGAAGAGATTCAAGAGTTAACCAAGCTCCAAAGCTTGTTCCTTTGCTTCTGTGAATATCGTGGCAAAAAAGGCAAGCAATATTCGTGCCCAACAATTATTCCATCTGAGGTAATCTCAAAACTCAAGGGGTTAAAACATTTAGGTATTGATGTGAACCCTGATGATGAGCGGTGGTATGAGAATGTACTGGACATTCTTCCAGAAATCTTGGGATTAGAGCATTTGCTGACTCTTAACTTATATATCCCGCATCTGGAACTTTTAAAGTTCATACCAGACCGTATATTATTGCGGGGTGATTTTAGATTTATTGTTGGTAGGCATATGCAAAGGATCATATCAAGTACCCCATCCACATGTGAGGCAAAATTTAAACAAAGTGGCTGTAGCTTGAAGTTTGTAAATGGTGATGATGTCCCTAATGAAATTGAAAGGCTTGTTAGACACAGTAAGGCTTTATTTCTGGAGAGACATAAGACAATCAATAGCCTATCAGGATTTAACGTGATGAATTTAGAGCAGCTGCGCGTATGTATGTTGGCAGAATGCAGAGAAATGCAAACAGTTGTTGATGGAAGAAAAACAATTAGGGGTAATGACATTTTCTCACATTTGCTATACTTGTGCATATCACACATGAAGAGTTTGAGAAGCATATGGGAAGGGCTACTTCCACCTCGCTGCTTTTTTGGTATGCTGAAGTGTTTAGTACTGCAAAATTGCCCGGAGTTAACAACTATCTTTACCTTGGATTTTTTGGGCAATCTTTCACTATTAAAGGAGATTATAGTTAAGGATTGTCCCAAAGTAACCACGTTGATAAGTGATGGATCATTCAAACATAAAGGAGAGGTCTTCCTGCCTAACTTGAGAAGGATATTACTTCTCCATCTTCCTGAGTTGATCACTATTTCCAATGGATGTTACATAGCTCCAAGCTTGAATACTATGGGAATTTATGATTGCCCAAAGCTCCAAAGCCTTTCTAAGTCGGAACTGTCAAGCCAAACTCTGAACATCAAGGGAGAAATCAAATGGTGGGATCAACTGCAATGGAGCAGAGAAGAGTGTGGAATACCGCAACGACCGTCTAAGTTTGATGGCATTTTTTCCTCAATTGATAATCAGGTTGATATAATGACTCAAATGGGAAATGATGGTGATGATATTGATGATAATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAGAGCAAAATGCCGAAACATTTAGCAGAGTGAGTGGTGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAAAGCAAGATGCCGGAAGATTTAGCAGAGTGAGTGGTGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAAAGCAAGATGCCGGAAGATTTAGCAGAATGACTTTTTCAGTCTCAAGAAAAATACCTGAACCTGAAGATCATACTCCAGATGATGGGTACAGTTGGAGGAAGTATGGCCAGAAAATAGTGGCTGGATCCAAAATTCCAAGTTCCTATTACAAATGTACTCATGTAGGTTGCCCAGTTAAAAAGAAATTAACGCGACGATCTGAGGAAGACCTAACAATAGTTGAAATCGTTTACAAGGGAACACATACGCACCCCAGTCGCCAGCGTGACAGATCCCTCCACGAACTAAAGTCCAATGTCTTCGATGATGACTATAGATGGAAGAAATATGGTGAGGAAATCATTAGCGGATCACCCAATCCAAGAAGTTATTATGGATGTGTTTCCACAGATTGCTCTGCTAAAAAACACGTGCAAGTATCAGATGAAGATCCAACCATGGTCGAAATCACTTCCACTGGAGTTCACACTTGTTCCACCCCATTTTGTGAAGACGCTGCCGTGAACGAACCATGTGACTCAGTACTGACTCAGACTTGA 2133 0.4027 MPLLTILDLSYTSVRELPDSLFELEQLREMYLKGCECFMKLSPKIGKLKKLEKLDLDGTEIIHLPEEIQELTKLQSLFLCFCEYRGKKGKQYSCPTIIPSEVISKLKGLKHLGIDVNPDDERWYENVLDILPEILGLEHLLTLNLYIPHLELLKFIPDRILLRGDFRFIVGRHMQRIISSTPSTCEAKFKQSGCSLKFVNGDDVPNEIERLVRHSKALFLERHKTINSLSGFNVMNLEQLRVCMLAECREMQTVVDGRKTIRGNDIFSHLLYLCISHMKSLRSIWEGLLPPRCFFGMLKCLVLQNCPELTTIFTLDFLGNLSLLKEIIVKDCPKVTTLISDGSFKHKGEVFLPNLRRILLLHLPELITISNGCYIAPSLNTMGIYDCPKLQSLSKSELSSQTLNIKGEIKWWDQLQWSREECGIPQRPSKFDGIFSSIDNQVDIMTQMGNDGDDIDDNADMMSLQTLFEHPEQNAETFSRVSGDIDDDADMMSLQTLFEHPKQDAGRFSRVSGDIDDDADMMSLQTLFEHPKQDAGRFSRMTFSVSRKIPEPEDHTPDDGYSWRKYGQKIVAGSKIPSSYYKCTHVGCPVKKKLTRRSEEDLTIVEIVYKGTHTHPSRQRDRSLHELKSNVFDDDYRWKKYGEEIISGSPNPRSYYGCVSTDCSAKKHVQVSDEDPTMVEITSTGVHTCSTPFCEDAAVNEPCDSVLTQT 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00054 710 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 507 618 IPR044810 GO:0003700
Pral4691g00054 710 SUPERFAMILY WRKY DNA-binding domain 628 692 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 SUPERFAMILY L domain-like 2 407 - -
Pral4691g00054 710 Gene3D Ribonuclease Inhibitor 187 409 IPR032675 -
Pral4691g00054 710 ProSiteProfiles WRKY domain profile. 552 618 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 Pfam WRKY DNA -binding domain 558 616 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 Pfam WRKY DNA -binding domain 633 689 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 SMART LRR_typ_2 1 24 IPR003591 -
Pral4691g00054 710 SMART LRR_typ_2 48 71 IPR003591 -
Pral4691g00054 710 ProSiteProfiles WRKY domain profile. 627 692 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Pral4691g00054 710 SUPERFAMILY WRKY DNA-binding domain 555 617 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 Gene3D WRKY domain 622 693 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 Gene3D WRKY domain 546 617 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 SMART WRKY_cls 557 617 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00054 710 SMART WRKY_cls 632 691 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00054 Pral-Chr4691 539954 547661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00054 554 692 WRKY Transcription Factor Family AT5G07100 37.297 5.53e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4691g00054 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00054 - - pcin:129284803 749.969