Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00052 ATGCCCTTGCTTACGATCCTAGACTTATCTTACACTAGTGTGCGTGAACTACCAGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAAATGTATTTGAAAGGTTGTGAATGTTTCATGAAATTGTCACCAAAAATTGGAAAATTGAAGAAACTTGAGAAGCTCGATCTTGACGGAACTGAGATCATACATCTGCCAGAAGAGATTCAAGAGTTAACCAAGCTCCAAAGCTTGTTCCTTTGCTTCTGTGAATATCGTGGCAAAAAAGGCAAGCAATATTCGTGCCCAACAATTATTCCATCTGAGGTAATCTCAAAACTCAAGGGGTTAAAACATTTAGGTATTGATGTGAACCCTGATGATGAGCGGTGGTATGAGAATGTACTGGACATTCTTCCAGAAATCTTGGGATTAGAGCATTTGCTGACTCTTAACTTATATATCCCGCATCTGGAACTTTTAAAGTTCATACCAGACCGTATATTATTGCGGGGTGATTTTAGATTTATTGTTGGTAGGCATATGCAAAGGATCATATCAAGTACCCCATCCACATGTGAGGCAAAATTTAAACAAAGTGGCTGTAGCTTGAAGTTTGTAAATGGTGATGATGTCCCTAATGAAATTGAAAGGCTTGTTAGACACAGTAAGGCTTTATTTCTGGAGAGACATAAGACAATCAATAGCCTATCAGGATTTAACGTGATGAATTTAGAGCAGCTGCGCGTATGTATGTTGGCAGAATGCAGAGAAATGCAAACAGTTGTTGATGGAAGAAAAACAATTAGGGGTAATGACATTTTCTCACATTTGCTATACTTGTGCATATCACACATGAAGAGTTTGAGAAGCATATGGGAAGGGCTACTTCCACCTCGCTGCTTTTTTGGTATGCTGAAGTGTTTAGTACTGCAAAATTGCCCGGAGTTAACAACTATCTTTACCTTGGATTTTTTGGGCAATCTTTCACTATTAAAGGAGATTATAGTTAAGGATTGTCCCAAAGTAACCACGTTGATAAGTGATGGATCATTCAAACATAAAGGAGAGGTCTTCCTGCCTAACTTGAGAAGGATATTACTTCTCCATCTTCCTGAGTTGATCACTATTTCCAATGGATGTTACATAGCTCCAAGCTTGAATACTATGGGAATTTATGATTGCCCAAAGCTCCAAAGCCTTTCTAAGTCGGAACTGTCAAGCCAAACTCTGAACATCAAGGGAGAAATCAAATGGTGGGATCAACTGCAATGGAGCAGAGAAGAGTGTGGAATACCGCAACGACCGTCTAAGTTTGATGGCATTTTTTCCTCAATTGATAATCAGGTTGATATAATGACTCAAATGGGAAATGATGGTGATGATATTGATGATAATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAGAGCAAAATGCCGAAACATTTAGCAGAATCAGTGATGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAGAGCAAGATGCCGAAACATTTAGCAGAGTGAGTGGTGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAAAGCAAGATGCCGGAAGATTTAGCAGAGTGAGTGGTGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAAAGCAAGATGCCGGAAGATTTAGCAGAATGACTTTTTCAGTCTCAAGAAAAATACCTGAACCTGAAGATCATACTCCAGATGATGGGTACAGTTGGAGGAAGTATGGCCAGAAAATAGTGGCTGGATCCAAAATTCCAAGTTCCTATTACAAATGTACTCATGTAGGTTGCCCAGTTAAAAAGAAATTAACGCGACGATCTGAGGAAGACCTAACAATAGTTGAAATCGTTTACAAGGGAACACATACGCACCCCAGTCGCCAGCGTGACAGATCCCTCCACGAACTAAAGTCCAATGTCTTCGATGATGACTATAGATGGAAGAAATATGGTGAGGAAATCATTAGCGGATCACCCAATCCAAGAAGTTATTATGGATGTGTTTCCACAGATTGCTCTGCTAAAAAACACGTGCAAGTATCAGATGAAGATCCAACCATGGTCGAAATCACTTCCACTGGAGTTCACACTTGTTCCACCCCATTTTGTGAAGACGCTGCCGTGAACGAACCATGTGACTCAGTACTGACTCAGACTTGA 2223 0.4031 MPLLTILDLSYTSVRELPDSLFELEQLREMYLKGCECFMKLSPKIGKLKKLEKLDLDGTEIIHLPEEIQELTKLQSLFLCFCEYRGKKGKQYSCPTIIPSEVISKLKGLKHLGIDVNPDDERWYENVLDILPEILGLEHLLTLNLYIPHLELLKFIPDRILLRGDFRFIVGRHMQRIISSTPSTCEAKFKQSGCSLKFVNGDDVPNEIERLVRHSKALFLERHKTINSLSGFNVMNLEQLRVCMLAECREMQTVVDGRKTIRGNDIFSHLLYLCISHMKSLRSIWEGLLPPRCFFGMLKCLVLQNCPELTTIFTLDFLGNLSLLKEIIVKDCPKVTTLISDGSFKHKGEVFLPNLRRILLLHLPELITISNGCYIAPSLNTMGIYDCPKLQSLSKSELSSQTLNIKGEIKWWDQLQWSREECGIPQRPSKFDGIFSSIDNQVDIMTQMGNDGDDIDDNADMMSLQTLFEHPEQNAETFSRISDDIDDDADMMSLQTLFEHPEQDAETFSRVSGDIDDDADMMSLQTLFEHPKQDAGRFSRVSGDIDDDADMMSLQTLFEHPKQDAGRFSRMTFSVSRKIPEPEDHTPDDGYSWRKYGQKIVAGSKIPSSYYKCTHVGCPVKKKLTRRSEEDLTIVEIVYKGTHTHPSRQRDRSLHELKSNVFDDDYRWKKYGEEIISGSPNPRSYYGCVSTDCSAKKHVQVSDEDPTMVEITSTGVHTCSTPFCEDAAVNEPCDSVLTQT 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00052 740 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 537 648 IPR044810 GO:0003700
Pral4691g00052 740 SMART WRKY_cls 587 647 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 SMART WRKY_cls 662 721 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 Pfam WRKY DNA -binding domain 663 719 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 Pfam WRKY DNA -binding domain 588 646 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 SMART LRR_typ_2 1 24 IPR003591 -
Pral4691g00052 740 SMART LRR_typ_2 48 71 IPR003591 -
Pral4691g00052 740 SUPERFAMILY WRKY DNA-binding domain 585 647 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 ProSiteProfiles WRKY domain profile. 657 722 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Pral4691g00052 740 Gene3D Ribonuclease Inhibitor 187 409 IPR032675 -
Pral4691g00052 740 SUPERFAMILY WRKY DNA-binding domain 658 722 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 ProSiteProfiles WRKY domain profile. 582 648 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 Gene3D WRKY domain 576 647 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 Gene3D WRKY domain 652 723 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00052 740 SUPERFAMILY L domain-like 2 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00052 Pral-Chr4691 539954 547661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00052 584 722 WRKY Transcription Factor Family AT5G07100 37.297 5.46e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4691g00052 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00052 - - pcin:129284803 761.911