Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00050 ATGCCCTTGCTTACGATCCTAGACTTATCTTACACTAGTGTGCGTGAACTACCAGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAAATGTATTTGAAAGGTTGTGAATGTTTCATGAAATTGTCACCAAAAATTGGAAAATTGAAGAAACTTGAGAAGCTCGATCTTGACGGAACTGAGATCATACATCTGCCAGAAGAGATTCAAGAGTTAACCAAGCTCCAAAGCTTGTTCCTTTGCTTCTGTGAATATCGTGGCAAAAAAGGCAAGCAATATTCGTGCCCAACAATTATTCCATCTGAGGTAATCTCAAAACTCAAGGGGTTAAAACATTTAGGTATTGATGTGAACCCTGATGATGAGCGGTGGTATGAGAATGTACTGGACATTCTTCCAGAAATCTTGGGATTAGAGCATTTGCTGACTCTTAACTTATATATCCCGCATCTGGAACTTTTAAAGTTCATACCAGACCGTATATTATTGCGGGGTGATTTTAGATTTATTGTTGGTAGGCATATGCAAAGGATCATATCAAGTACCCCATCCACATGTGAGGCAAAATTTAAACAAAGTGGCTGTAGCTTGAAGTTTGTAAATGGTGATGATGTCCCTAATGAAATTGAAAGGCTTGTTAGACACAGTAAGGCTTTATTTCTGGAGAGACATAAGACAATCAATAGCCTATCAGGATTTAACGTGATGAATTTAGAGCAGCTGCGCGTATGTATGTTGGCAGAATGCAGAGAAATGCAAACAGTTGTTGATGGAAGAAAAACAATTAGGGGTAATGACATTTTCTCACATTTGCTATACTTGTGCATATCACACATGAAGAGTTTGAGAAGCATATGGGAAGGGCTACTTCCACCTCGCTGCTTTTTTGGTATGCTGAAGTGTTTAGTACTGCAAAATTGCCCGGAGTTAACAACTATCTTTACCTTGGATTTTTTGGGCAATCTTTCACTATTAAAGGAGATTATAGTTAAGGATTGTCCCAAAGTAACCACGTTGATAAGTGATGGATCATTCAAACATAAAGGAGAGGTCTTCCTGCCTAACTTGAGAAGGATATTACTTCTCCATCTTCCTGAGTTGATCACTATTTCCAATGGATGTTACATAGCTCCAAGCTTGAATACTATGGGAATTTATGATTGCCCAAAGCTCCAAAGCCTTTCTAAGTCGGAACTGTCAAGCCAAACTCTGAACATCAAGGGAGAAATCAAATGGTGGGATCAACTGCAATGGAGCAGAGAAGAGTGTGGAATACCGCAACGACCGTCTAAGTTTGATGGCATTTTTTCCTCAATTGATAATCAGGTTGATATAATGACTCAAATGGGAAATGATGGTGATGATATTGATGATAATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAGAGCAAAATGCCGAAACATTTAGCAGAATCAGTGATGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAGAGCAAGATGCCGAAACATTTAGCAGAATGCGTGATGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAGAGCAAAATGCCGAAACATCTAGCAGAGTGAGTGGTGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAAAGCAAGATGCCGGAAGATTTAGCAGAGTGAGTGGTGATATTGACGATGATGCAGATATGATGTCGCTACAGACTTTATTTGAGCACCCAAAGCAAGATGCCGGAAGATTTAGCAGAATGACTTTTTCAGTCTCAAGAAAAATACCTGAACCTGAAGATCATACTCCAGATGATGGGTACAGTTGGAGGAAGTATGGCCAGAAAATAGTGGCTGGATCCAAAATTCCAAGTTCCTATTACAAATGTACTCATGTAGGTTGCCCAGTTAAAAAGAAATTAACGCGACGATCTGAGGAAGACCTAACAATAGTTGAAATCGTTTACAAGGGAACACATACGCACCCCAGTCGCCAGCGTGACAGATCCCTCCACGAACTAAAGTCCAATGTCTTCGATGATGACTATAGATGGAAGAAATATGGTGAGGAAATCATTAGCGGATCACCCAATCCAAGAAGTTATTATGGATGTGTTTCCACAGATTGCTCTGCTAAAAAACACGTGCAAGTATCAGATGAAGATCCAACCATGGTCGAAATCACTTCCACTGGAGTTCACACTTGTTCCACCCCATTTTGTGAAGACGCTGCCGTGAACGAACCATGTGACTCAGTACTGACTCAGACTTGA 2313 0.4038 MPLLTILDLSYTSVRELPDSLFELEQLREMYLKGCECFMKLSPKIGKLKKLEKLDLDGTEIIHLPEEIQELTKLQSLFLCFCEYRGKKGKQYSCPTIIPSEVISKLKGLKHLGIDVNPDDERWYENVLDILPEILGLEHLLTLNLYIPHLELLKFIPDRILLRGDFRFIVGRHMQRIISSTPSTCEAKFKQSGCSLKFVNGDDVPNEIERLVRHSKALFLERHKTINSLSGFNVMNLEQLRVCMLAECREMQTVVDGRKTIRGNDIFSHLLYLCISHMKSLRSIWEGLLPPRCFFGMLKCLVLQNCPELTTIFTLDFLGNLSLLKEIIVKDCPKVTTLISDGSFKHKGEVFLPNLRRILLLHLPELITISNGCYIAPSLNTMGIYDCPKLQSLSKSELSSQTLNIKGEIKWWDQLQWSREECGIPQRPSKFDGIFSSIDNQVDIMTQMGNDGDDIDDNADMMSLQTLFEHPEQNAETFSRISDDIDDDADMMSLQTLFEHPEQDAETFSRMRDDIDDDADMMSLQTLFEHPEQNAETSSRVSGDIDDDADMMSLQTLFEHPKQDAGRFSRVSGDIDDDADMMSLQTLFEHPKQDAGRFSRMTFSVSRKIPEPEDHTPDDGYSWRKYGQKIVAGSKIPSSYYKCTHVGCPVKKKLTRRSEEDLTIVEIVYKGTHTHPSRQRDRSLHELKSNVFDDDYRWKKYGEEIISGSPNPRSYYGCVSTDCSAKKHVQVSDEDPTMVEITSTGVHTCSTPFCEDAAVNEPCDSVLTQT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00050 770 Gene3D WRKY domain 682 753 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 Gene3D WRKY domain 606 677 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Pral4691g00050 770 SUPERFAMILY WRKY DNA-binding domain 688 752 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 ProSiteProfiles WRKY domain profile. 687 752 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 SMART LRR_typ_2 1 24 IPR003591 -
Pral4691g00050 770 SMART LRR_typ_2 48 71 IPR003591 -
Pral4691g00050 770 SMART WRKY_cls 692 751 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 SMART WRKY_cls 617 677 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 690 753 IPR044810 GO:0003700
Pral4691g00050 770 Gene3D Ribonuclease Inhibitor 188 409 IPR032675 -
Pral4691g00050 770 Pfam WRKY DNA -binding domain 693 749 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 Pfam WRKY DNA -binding domain 618 676 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 ProSiteProfiles WRKY domain profile. 612 678 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 SUPERFAMILY WRKY DNA-binding domain 615 677 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4691g00050 770 SUPERFAMILY L domain-like 2 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00050 Pral-Chr4691 539954 547661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00050 614 752 WRKY Transcription Factor Family AT5G07100 37.297 4.48e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4691g00050 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00050 - - pcin:129284803 763.837