Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00034 ATGGATGATAGTGAGTCCAGGATTCGGATAGAGGAAAATATGGAGACGAGGGAATCGGTTTATGAAGATGAGAACGGGACGCTCAGGGAACCGCTTCTTGTGAGTAAATACAGAGCGAACAACACTTCCCAGATCGCCATTGTTGGAGCCAATGTCTGTTCGATTGAAAGTCTCGACTACGAGATTATTGAGAGTGATCTTTATATGCAAGATTTGAGGTCTAGAACAAAGGTTGAGAAGTGCCGTTATCTTGCCTTAAAATGGACGCTTGCACTTCTGGTTGGTTTAGGCACGGGGCTTGTTGCCTTTTTTAACAACATTGCAGTTGAGAATATTTCTGGTACCAAGCTTCTACTTACCGAGAATCTCATGCTCGAAAACAAGTTTCTTCAGGCCTTTGCAGTGTATGGTGGTTGTAATTTGATTTTGGCAATTGCTGCAGCAGCCCTCTGTGCTTATATTGCTCCTTCAGCAGCAGGGTCAGGCATACCTGAGGTGAAGGCATACCTCAATGGGGTAGATGCTTATTCTATACTGGCTCCCAGTACCCTCTTTGTAAAGATTTTTGGTTCAATTTTTGGGGTGGCTGCGGGATTTGTCGTGGGCATGGAAGGACCTATGGTACATACTGGCTCTTGCATTGCCAATATACTTGGACAAGGTGGTTCCAAAAAATATGGCCTTAACTGGAAACTTCTTAGATACATTAAAAATGACCGAGACAGGAGAGATTTGATCACATGCGGTGCAGCAGCTGGGGTTGCTGGTGCCTTCCGTGCCCCAGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAACTTCATGGTGGAGAAGTGCTCTTCTGTGGCGGACTTTCTTTACAACAGCTGTAGTGGCTGTGGTATTGAGAGGCTTCATACAGTTATGCCGGGGTGGAAAATGTGGTCTCTTCGGAGAAGGAGGCTTGATCATGTTTGATGTTAGTTCAGAAAAGCCCTCCTACGAAATTCCTGACGTCCTGGCAGTCATATTGGTTGGAGTTATCGGAGGACTTTTGGGAAGCCTTTACAATTATCTAGTCCACAAAGTCCTTCGGACTTACAGTGTCATCAATGAGAGAGGCCCCAGAGTTAAAATTCTACTTGTTATTGTTATCAACCTCTTGACATCTTGTGCTTCATATGGCTTTCCATGGCTATCTCGATGTGTCCCTTGTCCTCCTAACTTGGGGGATAAGTGCCCAACCAGAGGTCGCTCTGGAAATTACAAGAGTTTCCAATGTCCACCAAATCATTACAATGATCTAGCCTCTCTTTTTTTCTCCCCCAATGATGATACTATACGCAACCTATTAACACCAAGTTCTGACAAGGAATTTCAGATCTCTACTCTCGCGACTTTCTTTGTGGTGATATACTTCCTTGGAATTATCACTTATGGCATTGCCATCCCCTCTGGCCTTTTCATTCCTGTCATCCTTGCTGGAGCCTCTTATGGGCGTCTTGCTTCTCGCCTCTTAAGTTCATTCACTGTTCTTGATGTGGGTATGTTTGCACTCCTTGGAGCTGCCTCTTTCCTTGGTGGAACCATGAGAATGACAGTTTCTATTTGTGTCATACTTCTTGAGCTCACCAATAACCTCTTGATACTCCCATTGGTGATGCTAGTTCAACTTATATCAAAGACTGTGGCTGATAATTTTAACCAAGGTATTTATGATCAGATTGTGAAGATGAAGGGCCTGCCATATCTTGAAGCAGTTACAGAACCGTACATGAGGCATTTAACAGCAGGAGATGTTGTTTCAGGCCCATTATTTACATTTTCTGGGGTTGAAAAAGTGAGGAATATTGTTCGTGCTTTGAGGATAACACAACATCATGGTTTTCCAGTAATTAATGAGCCTCCATTCTCAGAAGCTCCTCAGTTATGTGGGCTGGTGTTTAGGTCTCATCTTCTTGTGCTTCTTAAACAAAGGAAGTTCACAAAGCAAAAGGTTATGACTGGATCTACCATTATGAGGAACTTTGAAGCACATGATTTTGCAAAGCCAGGTTTAGGCAAGGGACTCAAGCTAGATGATGTTCATATCGGGGAGGAGGAGATGGAAATGTACGTTGATCTCCATCCAGTCACTAACACGTCACCGTACACAGTGGTGGAAACCATGTCTCTTGCAAAAGCTGCTCTTCTTTTCAGGGAGCTTGGCCTCAGGCATTTATTGGTGGTTCCAAAGACAACAGGAAGGCCTCCAGTTGTTGGGATATTGACAAGGCATGACTTTATGCCGGAGCATGTTTTGGGACTCTACCCTCACTTAGACCCTCACAGGGATTCCAACGTATTATGA 2328 0.442 MDDSESRIRIEENMETRESVYEDENGTLREPLLVSKYRANNTSQIAIVGANVCSIESLDYEIIESDLYMQDLRSRTKVEKCRYLALKWTLALLVGLGTGLVAFFNNIAVENISGTKLLLTENLMLENKFLQAFAVYGGCNLILAIAAAALCAYIAPSAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSIFGVAAGFVVGMEGPMVHTGSCIANILGQGGSKKYGLNWKLLRYIKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEATSWWRSALLWRTFFTTAVVAVVLRGFIQLCRGGKCGLFGEGGLIMFDVSSEKPSYEIPDVLAVILVGVIGGLLGSLYNYLVHKVLRTYSVINERGPRVKILLVIVINLLTSCASYGFPWLSRCVPCPPNLGDKCPTRGRSGNYKSFQCPPNHYNDLASLFFSPNDDTIRNLLTPSSDKEFQISTLATFFVVIYFLGIITYGIAIPSGLFIPVILAGASYGRLASRLLSSFTVLDVGMFALLGAASFLGGTMRMTVSICVILLELTNNLLILPLVMLVQLISKTVADNFNQGIYDQIVKMKGLPYLEAVTEPYMRHLTAGDVVSGPLFTFSGVEKVRNIVRALRITQHHGFPVINEPPFSEAPQLCGLVFRSHLLVLLKQRKFTKQKVMTGSTIMRNFEAHDFAKPGLGKGLKLDDVHIGEEEMEMYVDLHPVTNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKTTGRPPVVGILTRHDFMPEHVLGLYPHLDPHRDSNVL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00034 775 CDD ClC_6_like 56 577 - -
Pral4691g00034 775 FunFam Chloride channel ClC3 79 393 - -
Pral4691g00034 775 PRINTS Chloride channel signature 187 206 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4691g00034 775 PRINTS Chloride channel signature 156 173 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4691g00034 775 PRINTS Chloride channel signature 508 524 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4691g00034 775 PRINTS Chloride channel signature 251 270 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4691g00034 775 PRINTS Chloride channel signature 526 545 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4691g00034 775 PRINTS Chloride channel signature 564 578 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4691g00034 775 PRINTS Chloride channel signature 476 496 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4691g00034 775 SUPERFAMILY Clc chloride channel 66 579 IPR014743 -
Pral4691g00034 775 CDD CBS_pair_voltage-gated_CLC_euk_bac 589 757 - -
Pral4691g00034 775 Gene3D - 578 760 IPR046342 -
Pral4691g00034 775 SUPERFAMILY CBS-domain pair 582 755 IPR046342 -
Pral4691g00034 775 PRINTS Plant CLC chloride channel signature 272 280 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4691g00034 775 PRINTS Plant CLC chloride channel signature 61 69 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4691g00034 775 PRINTS Plant CLC chloride channel signature 428 444 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4691g00034 775 PRINTS Plant CLC chloride channel signature 286 296 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4691g00034 775 PRINTS Plant CLC chloride channel signature 304 311 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4691g00034 775 Gene3D Clc chloride channel 79 577 - -
Pral4691g00034 775 SMART cbs_1 708 759 IPR000644 -
Pral4691g00034 775 SMART cbs_1 597 650 IPR000644 -
Pral4691g00034 775 Pfam Voltage gated chloride channel 144 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4691g00034 775 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 13 760 - -
Pral4691g00034 775 ProSiteProfiles CBS domain profile. 705 768 IPR000644 -
Pral4691g00034 775 Pfam CBS domain 706 754 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00034 Pral-Chr4691 370847 376830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00034 20 768 Ion Channels AT5G49890 73.067 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00034 K05016 - jre:108988922 1126.69