Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00020 ATGGAACTTTCTAGTCAAGAACCAGAAATGCCAATCCCAATAAGCAGTACTACATATGGTGGGGAACGTGGTAATGGCCATGGGCAGGAGGGGCATGGGAACATGGCCCATCATCATCTCTACCACCGCCAAGACCCTTCCAATGGCTCCTCCATTAAACAACCAGCCCTTCTAGATCAACAAGACCATGGACCCTACATGAAGAAGAAGGAGGTAAGGTACAGAGAGTGCCTTAAGAATCATGCAGCTTCCATGGGAGGTAATGCCCTTGATGGCTGTGGTGAGTTCATGCCTAGTGGAGAAGAAGGCACCATAGAGGCCTTAACCTGCTCAGCTTGCCACTGTCACAGAAATTTCCACAGAAAAGAAGTAGAAGGTGAGTCTTCTTACTACAAATTTGGAAGGAAATTCTTCTTGGGAGATCATCACAATAGTGTCCTAGCAGCTGCCCCAGAGGCCCTTGTGGGGTACCCCACAGGCAACATTCTGCCTTCAAGAACTGTACCACCACACCAGATGATACTGCCCTACAATGTAGCGCCTGGGCCGCTTCCTTCGGAATCAGACGAGCAAGAGGATGGTGGTGGTGGAATAATGGTGAGTAGGCCAGCATCATCACAGATAGTGAAGAAGAGGTTCAGGACAAAGTTCACACAGGAGCAGAAAGAGAGGATGCTGGATTTTGCAGAGAAAGTTGGGTGGAAGATTCAGAAGCAGGAAGAGTCCGTTGTGCAACAGTTCTGTCAAGAGATTGGAGTCAGAAGAAGAGTGCTCAAGGTCTGGATGCACAACAACAAACACAATCTAGCCAAAAAAATTATTAATCCCCCACCACCCCCACCACCAACATCAACTACCGCAACTGCTTAG 870 0.4839 MELSSQEPEMPIPISSTTYGGERGNGHGQEGHGNMAHHHLYHRQDPSNGSSIKQPALLDQQDHGPYMKKKEVRYRECLKNHAASMGGNALDGCGEFMPSGEEGTIEALTCSACHCHRNFHRKEVEGESSYYKFGRKFFLGDHHNSVLAAAPEALVGYPTGNILPSRTVPPHQMILPYNVAPGPLPSESDEQEDGGGGIMVSRPASSQIVKKRFRTKFTQEQKERMLDFAEKVGWKIQKQEESVVQQFCQEIGVRRRVLKVWMHNNKHNLAKKIINPPPPPPPTSTTATA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00020 289 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 74 123 IPR006456 -
Pral4691g00020 289 Gene3D - 199 271 - -
Pral4691g00020 289 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 54 269 - -
Pral4691g00020 289 SUPERFAMILY Homeodomain-like 203 271 IPR009057 -
Pral4691g00020 289 MobiDBLite consensus disorder prediction 270 289 - -
Pral4691g00020 289 MobiDBLite consensus disorder prediction 1 64 - -
Pral4691g00020 289 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 73 124 IPR006456 -
Pral4691g00020 289 MobiDBLite consensus disorder prediction 273 289 - -
Pral4691g00020 289 MobiDBLite consensus disorder prediction 1 23 - -
Pral4691g00020 289 Pfam ZF-HD protein dimerisation region 72 124 IPR006456 -
Pral4691g00020 289 NCBIfam homeobox domain, ZF-HD class 210 266 IPR006455 -
Pral4691g00020 289 FunFam Zinc-finger homeodomain protein 2 199 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00020 Pral-Chr4691 263762 265733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00020 72 272 ZF-HD Transcription Factor Family AT2G02540 56.190 7.98e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pral4691g00020 ZF-HD_dimer 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00020 - - qsa:O6P43_012111 360.918