Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00014 ATGTCTGAAAGGCGGGTTTCTGATCCTAGCAAGCTTCATCTCAAGAAGAAGGACCTCGCTCAAATTCATAAAGCTGCTCGTGTCTTGAGGGATCCTGGTACGACGTCGTCCTGGAAGTCACCTCTTAGTTCATCGAGATCCGTTGCTGCTGCTTCCGCTTCTGCATGGAAGAACAATTTGTACAGTGGAAAAGAGAATAGCGGGTTGTTGTGCAACTGGGAGAATCACAAATCGTCAGGCGACAAGAGTGGAGTGGCCAAAAACGACTTCGTAGAGGAAGAAGAAGATGATGAGGTTGCTGCTGCTGGTGGCGCCAACGACGGTTCTTCTTCATCGCTTCTGGGAAGTTTCGAGGATTCCTTGAGTGATGCTCGAGGTTGTGATTCGAAGAGCAACACTTACTTGCGAGATGGGAGACGTTCTTCTATTTTCCGGTGTAAAGACGCTAATAATTTTTCTTCGGCCAGAAGAAAAATGGGCAGTATCAAGAGAAAGAGTAAGAAAACTAACACATATTCGGATAGCTTGTCAAAATATCGGAAACCAGCAACCAATTTGGGTAGGAAGTTTGTAAATTCCAAGACATTTCTAGAGGACTCAATTGAACAGTCTGATGATACTGAGGATTACTACAATTCTGAGGATTTAAGGCGAATTTTAGGGTCGTCTCGTTTGCTGTTGAAACTCAAGCGTAAGAATTGGTCTCGTTCTTCCTCAAAGTTACTGAGAGGTAGCCGAACTGAGGACTCTTCTTATACTTATAGCACGCCTGCGTTATCAACCTGCTCTTATAATAGGTTTGGTCACTATAATTCAAGTACTGTTGGATCCTGGGATGCCACGACAAGCTCATTGAATTATGGTGATGATGAGGTAGACGATCACTTGGATTTGCCTGGCCAGAGGGGATGCGGGATTCCTTGTTATTGGTCCAAGAGGACTCCAAAAAATAGAGGGATGTGTAGGAGTTGTTATTCTCCTTCTCTTTCAGAGACTTTGAGGAGGAAAGGAAGTAGCTTATTTTGTGGAAGTCAAAGTATCTATACAAGACACCGGAGGTCCTTATCATCAAGCCCTACCAAGTGGAGAGTTTCTTCAAGGAGCGCTCATGGTGTTCTTCCACTGCTCACCAGCAGTGGTGATGTTAGAGGAGGCTCGTCTGTAGGAACTGGAAGGAGCGATGATGAACTTTCCACGAACTTAGGGGAACTTTATCTTGAGGGTTTAAGCAGGTTAGATGGAAGGAGATGGTCATCAAGTTGTAGGAGTCAAGATGTTTTGGAGATTGTGGCTGTGGAGGGGGAAGGGGATGAGGAAGGCACACTAGAAAATGCTACTAGTTTCAGTCAGAAGTATAAACCTATTTCCTTTGATGACTTGATTGGCCAGAACATTGTGGCTCAGTCACTTATGAATGCTATTTCAAGGGATAGAATTGCGCCCATTTATCTTTTCCAAGGTCCACGTGGCACTGGTAAAACTTCAACAGCCAGAATTTTTGCAGCTGCTCTTAATTGTAAGGCTCCTGATTTAAGTAAGCCTTGTGGATACTGCAGGAATTGCACTGATCTCAATTCTGGAAAGAGTAGGAGTTTCTTGGAAGTTGATGGAACCAATAAGCAAGGGATTGATAGTGTTAGACATCTATTGAAAAGACTACCGGCAGGATCACCATCAGCCTCCTCACAATACACTGTATTTGTAATAGATGAGTGTCACTTGCTTCCTTCTAAGACATGGCTGGCATTTCTGAAGTTTCTGGAAGAACCACCTAGTCGAGTTGTGTTCATATTTATAACAACTGATCTTGAGAATGTTCCACGAACAATACAGTCTCGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGGTGATATTGTGGCCAGATTAAGGACACTATCTGCTGAAGAGAACCTGGATGTTGAAAAAGACGCGCTGGACCTTATTGCTATGAATGCAGATGGTTCGCTTCAAGATGCAGAAACTATGTTAGAACAACTGAGTTTGCTGGGGAAAAGAATTACTGCTTCACTTGTCAATGAACTTGTGGGTGTTGTCTCGGATGAAAAACTACTAGAGCTGTTGGAGATAGCAATGTCATCAGATACCTCAGAAACAGTGAAGAGAGCCAGAGAAGTGATGGATTTTGTGGCTGATCCGATGATTTTGATATCACAAATGGCATGCCTCATTATGGACATCATTGCCGGATCATATAGTGTCATTGATGCCAAACCTAGTGATTCGTATTTTGGTGGACGAAGTTTGAATGAATCGGAGTTGGGGAGGTTAAAGCATGCTTTGAAGCTGCTCTCAGAGGCTGAGAAACAGTTAAGGACTTCTAGTGAACGCTCAACATGGTTCACAGCTACCCTGCTACAGCTTGGTTCAATGCCTTCACCAGATCTTACCCAGTCAGGCACTGGAAGGAGGCAGAGCGGCAAGACTTCCGAATATGATCCATCAAGTGCTTCAAGAGAAGTTACTGCTCCAAAGCATAGATCGGATGTTAGATATATTTCTCGAATGTCAACATCCCCTATTTCCCAGCAACAACCTTTGAATGGCGATTCTAGAGGTCAATGGGATGTATCGTCTAAGTCAGATGGTTTCAGCTTGAGTTCACAGCCATCAAGTAGTCCAGTTCTAGGAGATGATGATGCAACGCCGGCTTCATCTGATGATCTTATTACTGGGAATATGATGGTAAGATGTGTAAATTCAGGGAAGTTACTTGATATCTGGGCAAGTTGTATAGGGAGGTGTCACTCTAAGACGTTGAGGCAGCTTCTCCACAATCATGGAAATCTTGTATCTATTTGTGAAGTTGAAGGTGTTCTGGTTGCATATGTTGCATTCAGAGATAGAGATGTTAAAATTAGGGCTGAAAGGTTTTTGAGTAGTATTACAAATTCAATGGAAATGGTACTCAGGTGCAATGTGGAGGTTAGAATTATTCATTTGCCAGATGGTGGAGGTGAAAATCTACCTGGTATCATGCAGGCAGGATCAACAATGGGAAGTGAGAGACCAAAAAAAGGAGACCATGCAAATGAAAAGGGTAGTCATTCTAGTTTTCTTCCTTTGCTGGATGAAAACTTGCAGCCTGTCATTGATTCATCAGATTTGACGGCTGGGAGGAACTGTGTGAGAGAGGATAAACAGGAAATTCCCACCCACAGAGTTGAATCTATTATACGTGAGCAGAGGCTGGAAACTGCGTGGCTTCAGGCTGTAGAAAAAGGTTCTCCAGGATTTTTGAATCATCCAAGACCTGAGAAGAATCAGGTACTGCCTCAGGAAAATGTTATCTGTAAAGACCCAGTAGAGTCCATTGATTCAACAAGGTTTTCCACTCAGCGTTGGGAAGATGACCCTCATCATGAAGTCAAAGTTTTGAAAGTTAAACACGGAAGAATCATACAAAATGGTCAGATTAGTAGAAACGGAGCCCGATGTCCCATGTCCCCAAGTTTATTGCACGGTAGCAGTTTAGCATCAAATTCCAACAAAGATAATCTGGGATATGAGTCAGGCTCCGGGGCCGCAGGTTGCGTGGGACTTCTATGTTGGAATAACTGCAAGCGAAGAAGGGTAAAGGTTAGAACACAAAAAGTTGGACATTTTACATTATTTAGTGACTGTGGTAAGTCAATGAAAAGGGAGGTCAAAAGGTAA 3681 0.4311 MSERRVSDPSKLHLKKKDLAQIHKAARVLRDPGTTSSWKSPLSSSRSVAAASASAWKNNLYSGKENSGLLCNWENHKSSGDKSGVAKNDFVEEEEDDEVAAAGGANDGSSSSLLGSFEDSLSDARGCDSKSNTYLRDGRRSSIFRCKDANNFSSARRKMGSIKRKSKKTNTYSDSLSKYRKPATNLGRKFVNSKTFLEDSIEQSDDTEDYYNSEDLRRILGSSRLLLKLKRKNWSRSSSKLLRGSRTEDSSYTYSTPALSTCSYNRFGHYNSSTVGSWDATTSSLNYGDDEVDDHLDLPGQRGCGIPCYWSKRTPKNRGMCRSCYSPSLSETLRRKGSSLFCGSQSIYTRHRRSLSSSPTKWRVSSRSAHGVLPLLTSSGDVRGGSSVGTGRSDDELSTNLGELYLEGLSRLDGRRWSSSCRSQDVLEIVAVEGEGDEEGTLENATSFSQKYKPISFDDLIGQNIVAQSLMNAISRDRIAPIYLFQGPRGTGKTSTARIFAAALNCKAPDLSKPCGYCRNCTDLNSGKSRSFLEVDGTNKQGIDSVRHLLKRLPAGSPSASSQYTVFVIDECHLLPSKTWLAFLKFLEEPPSRVVFIFITTDLENVPRTIQSRCQKYLFNKIKDGDIVARLRTLSAEENLDVEKDALDLIAMNADGSLQDAETMLEQLSLLGKRITASLVNELVGVVSDEKLLELLEIAMSSDTSETVKRAREVMDFVADPMILISQMACLIMDIIAGSYSVIDAKPSDSYFGGRSLNESELGRLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGSMPSPDLTQSGTGRRQSGKTSEYDPSSASREVTAPKHRSDVRYISRMSTSPISQQQPLNGDSRGQWDVSSKSDGFSLSSQPSSSPVLGDDDATPASSDDLITGNMMVRCVNSGKLLDIWASCIGRCHSKTLRQLLHNHGNLVSICEVEGVLVAYVAFRDRDVKIRAERFLSSITNSMEMVLRCNVEVRIIHLPDGGGENLPGIMQAGSTMGSERPKKGDHANEKGSHSSFLPLLDENLQPVIDSSDLTAGRNCVREDKQEIPTHRVESIIREQRLETAWLQAVEKGSPGFLNHPRPEKNQVLPQENVICKDPVESIDSTRFSTQRWEDDPHHEVKVLKVKHGRIIQNGQISRNGARCPMSPSLLHGSSLASNSNKDNLGYESGSGAAGCVGLLCWNNCKRRRVKVRTQKVGHFTLFSDCGKSMKREVKR 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00014 1226 Gene3D - 624 685 - -
Pral4691g00014 1226 Gene3D - 439 620 IPR027417 -
Pral4691g00014 1226 SMART AAA_5 479 641 IPR003593 GO:0016887
Pral4691g00014 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 668 IPR027417 -
Pral4691g00014 1226 MobiDBLite consensus disorder prediction 156 176 - -
Pral4691g00014 1226 MobiDBLite consensus disorder prediction 799 895 - -
Pral4691g00014 1226 FunFam DNA polymerase III subunit gamma/tau 443 621 - -
Pral4691g00014 1226 Coils Coil 765 785 - -
Pral4691g00014 1226 MobiDBLite consensus disorder prediction 841 887 - -
Pral4691g00014 1226 CDD HLD_clamp_pol_III_gamma_tau 622 685 IPR045085 -
Pral4691g00014 1226 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 450 853 - -
Pral4691g00014 1226 MobiDBLite consensus disorder prediction 799 825 - -
Pral4691g00014 1226 FunFam DNA polymerase III subunit gamma/tau 623 685 - -
Pral4691g00014 1226 NCBIfam DNA polymerase III subunit gamma/tau 447 796 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Pral4691g00014 1226 MobiDBLite consensus disorder prediction 24 45 - -
Pral4691g00014 1226 Pfam DNA polymerase III, delta subunit 462 622 - -
Pral4691g00014 1226 CDD AAA 461 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00014 Pral-Chr4691 208520 215071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00014 441 737 Core DNA Replication Machinery Family AT1G21690 25.484 3.97e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00014 - - gmx:100791561 1489.17