Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4691g00003 ATGATGGGTGAAAGAGTATTAGTGTTGCTGGTTCTTGTTTTCACCCCTTTTCTGGTTGCAGAAACAGGAACAGCTCATGAGGATTTTGTAGCTCTGAAGTCTCTTATGGATACGTTGAAGGACACTCCCGCTAGTTGGTCGAGTCCAGATCCTTGTGATGGTAGTTGGGAAGGAATCAAGTGCACCAACTCTCGTGTTACTTCGATAAAATTATCAGGCACAGATTTGACAGGCCAGCTATCAGGAGATATTGGTTCACTATCTGAATTAGAAACATTGGATCTCTCTTATAACAAGGGTTTGACTGGTTCACTTCCACCAGAAATTGCAAACTTGCAGAAACTGTCCAACTTGTTTCTTGTTGACTGTAGTTTCACTGGTCCCATTCCAGATAATATAGGATCCCTGCAGCAACTTGTCTTCTTATCTTTGAATAAAAACAGATTTTCCGGGAAAATTCCTCCTTCAATTGGTAATCTGACGCAACTTACTTGGCTAGATTTAACTGAGAATGAGCTTGAAGGACTCATCCCAGTATCAAGTGGCAGCATGCCTGGTCTTGATAAGCTACTCAATACAAAGCACTTTCATCTTGGAAAGAACAAGCTTTCAGGAGAGATCCCCCCTCAGCTTTTTACCTCAGAAATGACTCTGAAACATGTGCTTTTGGACAGCAATAAACTTACAGGGAACATTCCTTTAACACTTGGACTTGTTCAGAGTTTGGAGGTGGTGCGCTTTGACAATAATTCCTTAATCGGAAACTTGCCTCAGAACATCAACAATCTTACGAATCTTCAGGAGATGTACTTTTCCAACAATAAGCTGTCTGGTCCTATGCCAAGCCTGAGTAGAATGAATTTCCTCGCATACCTTGATATGAGCAACAACAGCTTCGATCGTTCAGATTTTCCACCATGGCTTCCAACTCTATGGAATTTAACAACATTAAAGATGGAGAACACTAAACTTACAGGGGAGATTCCTGCATCTTTCTTCACTCTTGCCCATTTACAGAATGTGGTGCTAAATGGTAATAATCTCAATGGCTCGTTGAACATTGGCACCACCTACAGCAAGCAGCTGCGACGAATTGAGTTGCAGGGTAACGAAATCGTGAATTGTGATCCGCAAGATCCGCCCTCCAACATCAAGATAACACTGGTGAGCAATCCTATTTGCTATGAAGGGAGAGAAACACGAAGTTTCTGTTCTGATGCGCCAGCCAATATGACATATGCAGCACCACCAAGTTCCTGCCCTCCAGTTACCTGTAGATCAGACCAGAATCTCAGTCCAAACTGCAAATGTGCATATCCATTTGAGGGAATTTTAAGTTTCAGAACTCCTTCCTTCCCAGACTGGCAAAACTCTTTGCCCATTCAGAAATTTCTAATGCGAGATGTTAAAGCTAATAATCTACCTGTGGATTCAGTATCTGTGACAAATCTGACCCAGAATCAATTTAAAGATGTTGAATTGACCTTACAAGTGTTCCCTTCAAGGGAAGATCATTTCAACAGAACTGAGACTTCTAGTATAACTTCTCTTCTAAGCAATCTGACCACTTATCCATTCTATTTCTATCCATATCCTTATGGACACTATGAGGAACCTGTGGAATCAAGTAAATCGTCAAATGTTGCTTTGATAACTGGAGCAATTGTTGGTTGTTCTGTTGTGCTGGTCTTACTACTTTTTGCTGGCGTTTATGCTTTCTACCAAAAGAAAAGGGCAGAAAAAGCAATTTCTCAAAGCAATCCTTTTGGAAAATGGGTTTCTAATGACAACAAAGTCACGACCCCTAATTTGAGAGGAGTAAGGCAATTCTCTTTTGCAGAGGTCAAGAAATACACCAGAAATTTTTCTCAAGCCAATGATATCGGAGCTGGGGGTTATGGAAAGGTTTATAGAGGGACACTTCCCAATGGGCAACTAGTAGCCATAAAAAGAGCTCAAAGAGAATCTAAGCAGGGAGGGCTTGAGTTTAAAGCTGAGATTGAACTTCTGTCAAGGGCCCACCATAACAATCTTGTAAGCCTTGTGGGGTTCTGCTTTGAGAGAGAAGAACAAATGCTGGTTTATGAGTATGTCCCAAATGGAACTTTACACGGTGCTATCTCAGGGAAATCAGCACTTAGATTGGACTGGCCTAGGAGGCTAAAGGTAATCCTTGGTGCTGCTAAAGGTTTAGCTTATCTACATGACCATGCGAATCCCCGTATCATACATAGGGACATCAAGTCAACTAACATCTTGCTGGATGATCACTTAAATGCCAAAGTAGCTGATTTTGGCCTTTCCAAGACTATGGTTGATTGTGGCAAAGATCATATCACCACTCAAGTTAAAGGAACAATGGGCTATTTAGATCCAGAGTATTACACAAGTCAGCATTTGACTGAAAAGAGCGATGTTTACAGCTTTGGAGTTCTAATGTTGGAGATGATAACTGCGAGAAAACCTATAGAAAAAGGGAAATACGTTGTGAAAGTGGTTAGGAATTTAATTGATAGAACAAAGGAGTTATATGGTCTTGAAGAAATTATTGACCCAGTCATTGGTTCAGAATCAACATTGAAGGGTTTAGAGAACTTTGTGGATCTCTCACTGAAGTGTCTTCAAGAGACAGGTGCTGATAGGCCTTCAATGAATGATGTGGTCAAAGAAATTGAAAGCATTTTGAAGATAGCTGGTTTGAACGACACTTCTGGATCAATGACATCTAATTCAGCTAGTTATGATGAGATAACAAGAGGGACTTCTCTGGATCTTTATAGTAATGACTCCTTTGATTCAGGTGCAGTACCCCTGCAACTAAAACTTGAGCCTAAGCAAGTCCACCGTACAATTTAG 2856 0.409 MMGERVLVLLVLVFTPFLVAETGTAHEDFVALKSLMDTLKDTPASWSSPDPCDGSWEGIKCTNSRVTSIKLSGTDLTGQLSGDIGSLSELETLDLSYNKGLTGSLPPEIANLQKLSNLFLVDCSFTGPIPDNIGSLQQLVFLSLNKNRFSGKIPPSIGNLTQLTWLDLTENELEGLIPVSSGSMPGLDKLLNTKHFHLGKNKLSGEIPPQLFTSEMTLKHVLLDSNKLTGNIPLTLGLVQSLEVVRFDNNSLIGNLPQNINNLTNLQEMYFSNNKLSGPMPSLSRMNFLAYLDMSNNSFDRSDFPPWLPTLWNLTTLKMENTKLTGEIPASFFTLAHLQNVVLNGNNLNGSLNIGTTYSKQLRRIELQGNEIVNCDPQDPPSNIKITLVSNPICYEGRETRSFCSDAPANMTYAAPPSSCPPVTCRSDQNLSPNCKCAYPFEGILSFRTPSFPDWQNSLPIQKFLMRDVKANNLPVDSVSVTNLTQNQFKDVELTLQVFPSREDHFNRTETSSITSLLSNLTTYPFYFYPYPYGHYEEPVESSKSSNVALITGAIVGCSVVLVLLLFAGVYAFYQKKRAEKAISQSNPFGKWVSNDNKVTTPNLRGVRQFSFAEVKKYTRNFSQANDIGAGGYGKVYRGTLPNGQLVAIKRAQRESKQGGLEFKAEIELLSRAHHNNLVSLVGFCFEREEQMLVYEYVPNGTLHGAISGKSALRLDWPRRLKVILGAAKGLAYLHDHANPRIIHRDIKSTNILLDDHLNAKVADFGLSKTMVDCGKDHITTQVKGTMGYLDPEYYTSQHLTEKSDVYSFGVLMLEMITARKPIEKGKYVVKVVRNLIDRTKELYGLEEIIDPVIGSESTLKGLENFVDLSLKCLQETGADRPSMNDVVKEIESILKIAGLNDTSGSMTSNSASYDEITRGTSLDLYSNDSFDSGAVPLQLKLEPKQVHRTI 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4691g00003 951 Gene3D Phosphorylase Kinase; domain 1 593 697 - -
Pral4691g00003 951 Pfam Leucine rich repeat N-terminal domain 28 61 IPR013210 -
Pral4691g00003 951 SUPERFAMILY Protein kinase-like (PK-like) 607 899 IPR011009 -
Pral4691g00003 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Pral4691g00003 951 FunFam Leucine-rich repeat protein kinase family protein 184 282 - -
Pral4691g00003 951 Gene3D Transferase(Phosphotransferase) domain 1 698 911 - -
Pral4691g00003 951 Pfam Protein kinase domain 623 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4691g00003 951 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Pral4691g00003 951 PANTHER RECEPTOR-LIKE PROTEIN 55 35 894 - -
Pral4691g00003 951 CDD STKc_IRAK 628 894 - -
Pral4691g00003 951 Gene3D Ribonuclease Inhibitor 281 410 IPR032675 -
Pral4691g00003 951 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Pral4691g00003 951 FunFam Leucine-rich repeat protein kinase family protein 590 697 - -
Pral4691g00003 951 FunFam Leucine-rich repeat family protein 27 183 - -
Pral4691g00003 951 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 907 - -
Pral4691g00003 951 ProSiteProfiles Protein kinase domain profile. 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4691g00003 951 SMART serkin_6 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4691g00003 951 SUPERFAMILY L domain-like 50 394 - -
Pral4691g00003 951 Gene3D Ribonuclease Inhibitor 183 280 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4691g00003 Pral-Chr4691 69216 76535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4691g00003 8 945 Receptor kinase-like Gene Family AT5G49760 51.735 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral4691g00003 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4691g00003 - - gmx:100811702 1099.35