Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4690g00002 ATGATCAAACTATGCCCTTCAGAGCTGAGGGTAATGAGCAAAGATGGAAAAGTGGTGGCGTGCAGGGGCCCTTGTGCGGCAGATGGCTATGAAACTTGTGCCAACAGGCCTGCCAAGCCCTCCTCTTCTGCAGAAGTATACAAGAGCGTTTGCCAACATGCCTATAGCTACCCGGAAGACGATCATCTAAGCATGTTCCCGTGTCAAGGTGCAGATTATAATATCACCTTTTGTGAATCACCCTACACAGATTTGGACACTTCTGGCTCCTCATCATGCACGGAAACCATCACAACATCTCATTACATCAAGGATCCAAATACAATAAGCTCCAAAGGGGGTTTGTTCACACTAGGGTTCTTCAGTCCAGAAAATTCCACAAATCGCTATGTGGGAATTTGGTACATGTCCAATTCAACTATTGTATGGGCAGCTAACAGAAATCGACCATTAAGGGATACTTCAGGAATTTTTAAGGTATCTGAAGATGGCAATCTTATCGTATTAGATGGGCAAAACCAAACCATTTGGTCATCAAATGTATCAAATATTTCATCTACTACTAGTTTTCAGATTTTAGATTCTGGAAACCTTGTCCTAACCGATAACTTGACGAAAACCATATGGCAAAGTTTTGAGCATCCTTCAGATACATTGTTGCCAAGCATGAAAATTACAAGCAACGAAAGAGCAGGGGAGAAACAAAAGTTAACAGCATGGAAAAATCAGTCTGATCCATCCGTTGGCAATTTTTCTATGAGCCTAGAACAACTAAATTTTGCAGAACTGTTCATATGGAATGGAACTAGCCCCTATTGGCGTAGTGGTCCATGGAATGGCCAAGGCCTTACAACAGTCCTCAGGATGAGTTCCGAGTATGATAATGGTGCTGACGAGATGGTTGTTAGGTTATCAAATGGGTCTGACATCAAAGAGATAGTTGTTTTGAATGCAAAAGGGAAGTTATTACATAAACAATGGGATGATACTAAGAGGAGATGGCTAGAAACAAATCTTTTTCAAAATTCAGATTGTGATGTCTATGGTATATGTGGGGAATTCGGAATTTGCAATTCAAAGAGCGCACCAATCTGCAGTTGTTTGAGTGGGTTTGAACCAAGAAATAATGAGGAATGGAATAGACAAAATTGGACAGGTGGTTGTGTTGGGAAATCAACTCGACGATGTGAGGAAATGAAAAATGGGAGTTTCAATGGAAAGGAAGATACCTTTTTCCATCTGCAAAATGTTAAAGCACCAAACTTTGGAGAACAATCATCTCATTCAGAAGATGAATGTAGAACCCATTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATAATTCAGTGCTTGGCTGTATGACTTGGAAAGAAAATCTAATTGACATACAACAGTTCTCAAATGCAGGAATTGACTTATATATTCGTGCAGCCAAGTCAGACTTTGATAAGAAGAGGCATAGAACATTCATCATTATCATTGTTGCAGTAATAGGAACTATCATTATCAGTGTCACTTGTTCATGCTTCTTATGGAAATGGAAGGCAAAACATTCAGGAAAACGGCATAGCAAACAGGTCTTGTTAAAAAGGGATGGTGCAAATGTAGACAAAACAAGCGGCAATATTATTGGAAAATTGTCACAAGTTAAATTCCAGGAGTTATTGGTCTATGATTTTGAAAAGGTTGCAATGGCTACAAACAACTTTCAATTGACCAATAAACTTGGGCAAGGCGGTTTTGGTCCTGTCTATAAGGGAACACTCCAAGATGGTCAGGATATAGCAGTTAAGAGATTATCAAGAGCATCTGGACAAGGACAAGAGGAATTCATGAATGAGATGATTGTCATTTCCAGGCTTCAACATCGTAATCTCGTAAAACTTTTAGGTTGTTGTATTGAAGGAGAAGAAAAGATGTTGATCTATGAGTACATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCCAGAGAAAAGCAAACTTCTAGACTGGGGAAAGCGTTTTGTCATTATTGAAGGAGTAGCTAGAGGAGTACTTTATCTTCATAGGGACTCTAGACTAAAAATTATACATAGGGACCTAAAGGCAAGTAATATCTTGCTAGATGAGAACTTGATTCCAAAGATATCAGATTTTGGCATGGCTAGAATTTTCAAAGGAAGTGAAGATCAAGCTAACACAAGAAGAGTTGTCGGAACCTATGGCTATATGTCTCCAGAATATGCTATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTTTACTATTAGAGATTATAAGTGGAAGAAGAAACTCAAGCTTTTATAATAATGAGCACTCTCTTAGCCTTCTAGGATTTGCATGGAAATTATGGAATGAAGGAAACATTGTAAAGCTAATAGACCCGAAAACATCTAATCAAAACCTGGAGAAGGATATATTGAGGTGCATACACATAGGACTTCTGTGTGTACAAGACCTTGCAATAGAGAGGCCAGGTATGAGCACTGTAGTTTCTATGCTTAATAGTGAGATTGTCAATCTTCCTCCTCCAAGGCAACCTGCGTTCATCCAATGGCAGAGTATATTGAATCAATTGACCCCAGAAGAGAATCAAAGATTATTTTCTAACAACGAAGTTAGTATTAGTGACATACAAGGCAGATAG 2670 0.3869 MIKLCPSELRVMSKDGKVVACRGPCAADGYETCANRPAKPSSSAEVYKSVCQHAYSYPEDDHLSMFPCQGADYNITFCESPYTDLDTSGSSSCTETITTSHYIKDPNTISSKGGLFTLGFFSPENSTNRYVGIWYMSNSTIVWAANRNRPLRDTSGIFKVSEDGNLIVLDGQNQTIWSSNVSNISSTTSFQILDSGNLVLTDNLTKTIWQSFEHPSDTLLPSMKITSNERAGEKQKLTAWKNQSDPSVGNFSMSLEQLNFAELFIWNGTSPYWRSGPWNGQGLTTVLRMSSEYDNGADEMVVRLSNGSDIKEIVVLNAKGKLLHKQWDDTKRRWLETNLFQNSDCDVYGICGEFGICNSKSAPICSCLSGFEPRNNEEWNRQNWTGGCVGKSTRRCEEMKNGSFNGKEDTFFHLQNVKAPNFGEQSSHSEDECRTHCLENCTCKAYSYNSVLGCMTWKENLIDIQQFSNAGIDLYIRAAKSDFDKKRHRTFIIIIVAVIGTIIISVTCSCFLWKWKAKHSGKRHSKQVLLKRDGANVDKTSGNIIGKLSQVKFQELLVYDFEKVAMATNNFQLTNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASGQGQEEFMNEMIVISRLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDAFIFDPEKSKLLDWGKRFVIIEGVARGVLYLHRDSRLKIIHRDLKASNILLDENLIPKISDFGMARIFKGSEDQANTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRRNSSFYNNEHSLSLLGFAWKLWNEGNIVKLIDPKTSNQNLEKDILRCIHIGLLCVQDLAIERPGMSTVVSMLNSEIVNLPPPRQPAFIQWQSILNQLTPEENQRLFSNNEVSISDIQGR 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4690g00002 889 Pfam D-mannose binding lectin 140 241 IPR001480 -
Pral4690g00002 889 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 647 850 - -
Pral4690g00002 889 SMART blect_4 100 215 IPR001480 -
Pral4690g00002 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Pral4690g00002 889 Pfam S-locus glycoprotein domain 273 374 IPR000858 GO:0048544
Pral4690g00002 889 ProSiteProfiles Bulb-type lectin domain profile. 94 213 IPR001480 -
Pral4690g00002 889 SMART ntp_6 406 478 IPR003609 -
Pral4690g00002 889 SUPERFAMILY alpha-D-mannose-specific plant lectins 131 280 IPR036426 -
Pral4690g00002 889 Pfam Thaumatin family 3 78 IPR001938 -
Pral4690g00002 889 Gene3D Transferase(Phosphotransferase) domain 1 647 848 - -
Pral4690g00002 889 Gene3D Phosphorylase Kinase; domain 1 536 646 - -
Pral4690g00002 889 Gene3D Thaumatin 1 78 IPR037176 -
Pral4690g00002 889 ProSiteProfiles PAN/Apple domain profile. 396 479 IPR003609 -
Pral4690g00002 889 ProSiteProfiles Thaumatin family profile. 1 78 IPR001938 -
Pral4690g00002 889 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 90 212 - -
Pral4690g00002 889 CDD B_lectin 100 215 IPR001480 -
Pral4690g00002 889 SUPERFAMILY Protein kinase-like (PK-like) 556 871 IPR011009 -
Pral4690g00002 889 Gene3D - 90 213 IPR036426 -
Pral4690g00002 889 ProSiteProfiles Protein kinase domain profile. 571 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4690g00002 889 FunFam receptor-like serine/threonine-protein kinase SD1-8 546 646 - -
Pral4690g00002 889 CDD PAN_AP_plant 405 477 - -
Pral4690g00002 889 SUPERFAMILY Hairpin loop containing domain-like 422 475 - -
Pral4690g00002 889 Pfam PAN-like domain 406 464 IPR003609 -
Pral4690g00002 889 CDD STKc_IRAK 577 843 - -
Pral4690g00002 889 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 92 833 - -
Pral4690g00002 889 SMART serkin_6 571 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4690g00002 889 SUPERFAMILY Osmotin, thaumatin-like protein 3 78 IPR037176 -
Pral4690g00002 889 Pfam Protein tyrosine and serine/threonine kinase 572 819 IPR001245 GO:0004672|GO:0006468
Pral4690g00002 889 PIRSF SRK 77 889 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4690g00002 Pral-Chr4690 9815 13743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4690g00002 481 858 Receptor kinase-like Gene Family AT4G05200 49.606 7.94e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4690g00002 PK_Tyr_Ser-Thr 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4690g00002 - - pcin:129286414 1028.08