Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4690g00001 ATGATCAAACTATGCCCTTCAGAGCTGAGGGTAATGAGCAAAGATGGAAAAGTGGTGGCGTGCAGGGGCCCTTGTGCGGCAGATGGCTATGAAACTTGTGCCAACAGGCCTGCCAAGCCCTCCTCTTCTGCAGAAGTATACAAGAGCGTTTGCCAACATGCCTATAGCTACCCGGAAGACGATCATCTAAGCATGTTCCCGTGTCAAGGTGCAGATTATAATATCACCTTTTGTGAATCACCCTACACAGATTTGGACACTTCTGGCTCCTCATCATGCACGGAAACCATCACAACATCTCATTACATCAAGGATCCAAATACAATAAGCTCCAAAGGGGGTTTGTTCACACTAGGGTTCTTCAGTCCAGAAAATTCCACAAATCGCTATGTGGGAATTTGGTACATGTCCAATTCAACTATTGTATGGGCAGCTAACAGAAATCGACCATTAAGGGATACTTCAGGAATTTTTAAGGTATCTGAAGATGGCAATCTTATCGTATTAGATGGGCAAAACCAAACCATTTGGTCATCAAATGTATCAAATATTTCATCTACTACTAGTTTTCAGATTTTAGATTCTGGAAACCTTGTCCTAACCGATAACTTGACGAAAACCATATGGCAAAGTTTTGAGCATCCTTCAGATACATTGTTGCCAAGCATGAAAATTACAAGCAACGAAAGAGCAGGGGAGAAACAAAAGTTAACAGCATGGAAAAATCAGTCTGATCCATCCGTTGGCAATTTTTCTATGAGCCTAGAACAACTAAATTTTGCAGAACTGTTCATATGGAATGGAACTAGCCCCTATTGGCGTAGTGGTCCATGGAATGGCCAAGGCCTTACAACAGTCCTCAGGATGAGTTCCGAGTATGATAATGGTGCTGACGAGATGGTTGTTAGGTTATCAAATGGGTCTGACATCAAAGAGATAGTTGTTTTGAATGCAAAAGGGAAGTTATTACATAAACAATGGGATGATACTAAGAGGAGATGGCTAGAAACAAATCTTTTTCAAAATTCAGATTGTGATGTCTATGGTATATGTGGGGAATTCGGAATTTGCAATTCAAAGAGCGCACCAATCTGCAGTTGTTTGAGTGGGTTTGAACCAAGAAATAATGAGGAATGGAATAGACAAAATTGGACAGGTGGTTGTGTTGGGAAATCAACTCGACGATGTGAGGAAATGAAAAATGGGAGTTTCAATGGAAAGGAAGATACCTTTTTCCATCTGCAAAATGTTAAAGCACCAAACTTTGGAGAACAATCATCTCATTCAGAAGATGAATGTAGAACCCATTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATAATTCAGTGCTTGGCTGTATGACTTGGAAAGAAAATCTAATTGACATACAACAGTTCTCAAATGCAGGAATTGACTTATATATTCGTGCAGCCAAGTCAGACTTTGATAAGAAGAGGCATAGAACATTCATCATTATCATTGTTGCAGTAATAGGAACTATCATTATCAGTGTCACTTGTTCATGCTTCTTATGGAAATGGAAGGCAAAACATTCAGCAGGAAAACGGCATAGCAAACAGGTCTTGTTAAAAAGGGATGGTGCAAATGTAGACAAAACAAGCGGCAATATTATTGGAAAATTGTCACAAGTTAAATTCCAGGAGTTATTGGTCTATGATTTTGAAAAGGTTGCAATGGCTACAAACAACTTTCAATTGACCAATAAACTTGGGCAAGGCGGTTTTGGTCCTGTCTATAAGGGAACACTCCAAGATGGTCAGGATATAGCAGTTAAGAGATTATCAAGAGCATCTGGACAAGGACAAGAGGAATTCATGAATGAGATGATTGTCATTTCCAGGCTTCAACATCGTAATCTCGTAAAACTTTTAGGTTGTTGTATTGAAGGAGAAGAAAAGATGTTGATCTATGAGTACATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCCAGAGAAAAGCAAACTTCTAGACTGGGGAAAGCGTTTTGTCATTATTGAAGGAGTAGCTAGAGGAGTACTTTATCTTCATAGGGACTCTAGACTAAAAATTATACATAGGGACCTAAAGGCAAGTAATATCTTGCTAGATGAGAACTTGATTCCAAAGATATCAGATTTTGGCATGGCTAGAATTTTCAAAGGAAGTGAAGATCAAGCTAACACAAGAAGAGTTGTCGGAACCTATGGCTATATGTCTCCAGAATATGCTATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTTTACTATTAGAGATTATAAGTGGAAGAAGAAACTCAAGCTTTTATAATAATGAGCACTCTCTTAGCCTTCTAGGATTTGCATGGAAATTATGGAATGAAGGAAACATTGTAAAGCTAATAGACCCGAAAACATCTAATCAAAACCTGGAGAAGGATATATTGAGGTGCATACACATAGGACTTCTGTGTGTACAAGACCTTGCAATAGAGAGGCCAGGTATGAGCACTGTAGTTTCTATGCTTAATAGTGAGATTGTCAATCTTCCTCCTCCAAGGCAACCTGCGTTCATCCAATGGCAGAGTATATTGAATCAATTGACCCCAGAAGAGAATCAAAGATTATTTTCTAACAACGAAGTTAGTATTAGTGACATACAAGGCAGATAG 2673 0.3872 MIKLCPSELRVMSKDGKVVACRGPCAADGYETCANRPAKPSSSAEVYKSVCQHAYSYPEDDHLSMFPCQGADYNITFCESPYTDLDTSGSSSCTETITTSHYIKDPNTISSKGGLFTLGFFSPENSTNRYVGIWYMSNSTIVWAANRNRPLRDTSGIFKVSEDGNLIVLDGQNQTIWSSNVSNISSTTSFQILDSGNLVLTDNLTKTIWQSFEHPSDTLLPSMKITSNERAGEKQKLTAWKNQSDPSVGNFSMSLEQLNFAELFIWNGTSPYWRSGPWNGQGLTTVLRMSSEYDNGADEMVVRLSNGSDIKEIVVLNAKGKLLHKQWDDTKRRWLETNLFQNSDCDVYGICGEFGICNSKSAPICSCLSGFEPRNNEEWNRQNWTGGCVGKSTRRCEEMKNGSFNGKEDTFFHLQNVKAPNFGEQSSHSEDECRTHCLENCTCKAYSYNSVLGCMTWKENLIDIQQFSNAGIDLYIRAAKSDFDKKRHRTFIIIIVAVIGTIIISVTCSCFLWKWKAKHSAGKRHSKQVLLKRDGANVDKTSGNIIGKLSQVKFQELLVYDFEKVAMATNNFQLTNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASGQGQEEFMNEMIVISRLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDAFIFDPEKSKLLDWGKRFVIIEGVARGVLYLHRDSRLKIIHRDLKASNILLDENLIPKISDFGMARIFKGSEDQANTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRRNSSFYNNEHSLSLLGFAWKLWNEGNIVKLIDPKTSNQNLEKDILRCIHIGLLCVQDLAIERPGMSTVVSMLNSEIVNLPPPRQPAFIQWQSILNQLTPEENQRLFSNNEVSISDIQGR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4690g00001 890 SMART blect_4 100 215 IPR001480 -
Pral4690g00001 890 FunFam receptor-like serine/threonine-protein kinase SD1-8 547 647 - -
Pral4690g00001 890 ProSiteProfiles Bulb-type lectin domain profile. 94 213 IPR001480 -
Pral4690g00001 890 SMART ntp_6 406 478 IPR003609 -
Pral4690g00001 890 SUPERFAMILY alpha-D-mannose-specific plant lectins 131 280 IPR036426 -
Pral4690g00001 890 Pfam Thaumatin family 3 78 IPR001938 -
Pral4690g00001 890 Gene3D Thaumatin 1 78 IPR037176 -
Pral4690g00001 890 SMART serkin_6 572 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4690g00001 890 ProSiteProfiles PAN/Apple domain profile. 396 479 IPR003609 -
Pral4690g00001 890 PIRSF SRK 77 890 IPR024171 GO:0004674
Pral4690g00001 890 SUPERFAMILY Protein kinase-like (PK-like) 557 872 IPR011009 -
Pral4690g00001 890 ProSiteProfiles Thaumatin family profile. 1 78 IPR001938 -
Pral4690g00001 890 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 90 212 - -
Pral4690g00001 890 CDD B_lectin 100 215 IPR001480 -
Pral4690g00001 890 Gene3D - 90 213 IPR036426 -
Pral4690g00001 890 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 92 834 - -
Pral4690g00001 890 Gene3D Phosphorylase Kinase; domain 1 537 647 - -
Pral4690g00001 890 Pfam Protein tyrosine and serine/threonine kinase 573 820 IPR001245 GO:0004672|GO:0006468
Pral4690g00001 890 Pfam S-locus glycoprotein domain 273 374 IPR000858 GO:0048544
Pral4690g00001 890 CDD STKc_IRAK 578 844 - -
Pral4690g00001 890 CDD PAN_AP_plant 405 477 - -
Pral4690g00001 890 SUPERFAMILY Hairpin loop containing domain-like 422 475 - -
Pral4690g00001 890 Pfam PAN-like domain 406 464 IPR003609 -
Pral4690g00001 890 ProSiteProfiles Protein kinase domain profile. 572 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4690g00001 890 SUPERFAMILY Osmotin, thaumatin-like protein 3 78 IPR037176 -
Pral4690g00001 890 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 648 851 - -
Pral4690g00001 890 Gene3D Transferase(Phosphotransferase) domain 1 648 849 - -
Pral4690g00001 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Pral4690g00001 890 Pfam D-mannose binding lectin 140 241 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4690g00001 Pral-Chr4690 9815 13743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4690g00001 530 890 Receptor kinase-like Gene Family AT4G23140 51.344 1.13e-122 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4690g00001 PK_Tyr_Ser-Thr 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4690g00001 - - pcin:129286414 1029.62