Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral468g00009 ATGGCCAGAGGGGGTGGACTCTCCATTGATTCCGATCCAGCTTTGAGGAGCTCCTTCCTCTTCAATCCCATTGTTCTCAACTCTTTCCCTCTCGAAGACGCCTTTCAACCTCCCATGGACTCTTCCCTCCCTTTCCCTGCAGAGATGGACTTCTTCAGTAACAGCAATCTCAAGCCTTCATCTTCCAACGATGATTTCTCTACCCCTCCCCATCCTCTTGAATTCAAAGTAAACACTGGTCTCAGTCTCTTGACCACTAACACCGACCAATCCTTGGTGGACGATGAATTTTCCATATATCCTAATGGTAACGTGAAACGAGCCAATATTGAGATTGATGAGGTTGCTGTTCTTCGCGCTGAGTTAGACCAGATGATGGGAGAGAACAGTAAGCTGAGAGACATGCTAAATGAGGTCAATACTAATTACAATGCCTTGAAGATGCATACAGACTTCATCGAGTCTCTTAAGGGCAGGGAGGACGCTGAGAAACCAGAAAACCAAGTGCCTGATGCGAGTTCAGAAGAAAAGAAACAAACAGATAGTAACAGAGGAACATTAGTGTCAAGGCAATTTATAGATCTTGGATTAGCTTCAATCAATGATGGTGAGGCTAATAGTGATGAACATTCGCTTTCTTCGTCCGTCAGGAGAAGCAATGACAGATCAAGATCACCCTTGGAAGTGGAATGTAGGGCCAAGATTGGTTCTGATGAGAAGGAATTCAACAAAGGAACTGAAAGTGAACAAGAAGCTGACAAAATTAATCAGAAGTATAGTCCTCCCAGAAACGTTGATGATCAGCTGGAAGCCACCATGAAGAAGGCAAGAGTTTCAGTTAGAGCTCGATCAGAAGCACCCATGATTACTGATGGATGTCAATGGAGAAAATATGGGCAGAAGAAGGCCAAAGGGAATCCATGCCCTCGAGCTTATTATCGTTGCACCATGGCTTCAGGTTGTCCTGTCAGGAAACAGGTGCAAAGGTGTGCAGAGGATCGAACAATTTTGGTAACAACATATGAAGGAAATCATAACCATGCACTGCCTCCAGCAGCAATGGCGATGGCACAAACAACAGCAGCAGCGACAAGGATGTTGCTTTCAGGATCAATGTCAAGTAGTGATGGTTTAATGAATGGAAGCTTCTTGATAAGGACGACATTGTTTCCTTGTTCTTCAAGTAACATGGCAACTCTCTCGGCCACAGCTCCATTTCCAACGGTTACATTGGATCTAACCATTCCTCCAACAACACAACCTTCTACCCAATTTCAAATGCCTTTCTCAAATAATTCCCCTAATGGTTTTACCCAGGTGTTGGCTCAAGCACTTTACAACAACAATCAATCAAATTTTTCAGGACTTCAAATGAATAATAAAGACCCCTTGCAATTGAGTGCAGCTATAGCAGCTGACCCTAACCTCACAGCAGCTTTAACGGCGGCCATTACTTCTATCATGGGTTCTACCCTACCAAAGAATGTTAACAGTGATAATAATGGCAATGTTACTAGTGGAAATAACAGCGGTTTAAATTTTTTTGGAAGCTAG 1554 0.435 MARGGGLSIDSDPALRSSFLFNPIVLNSFPLEDAFQPPMDSSLPFPAEMDFFSNSNLKPSSSNDDFSTPPHPLEFKVNTGLSLLTTNTDQSLVDDEFSIYPNGNVKRANIEIDEVAVLRAELDQMMGENSKLRDMLNEVNTNYNALKMHTDFIESLKGREDAEKPENQVPDASSEEKKQTDSNRGTLVSRQFIDLGLASINDGEANSDEHSLSSSVRRSNDRSRSPLEVECRAKIGSDEKEFNKGTESEQEADKINQKYSPPRNVDDQLEATMKKARVSVRARSEAPMITDGCQWRKYGQKKAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTILVTTYEGNHNHALPPAAMAMAQTTAAATRMLLSGSMSSSDGLMNGSFLIRTTLFPCSSSNMATLSATAPFPTVTLDLTIPPTTQPSTQFQMPFSNNSPNGFTQVLAQALYNNNQSNFSGLQMNNKDPLQLSAAIAADPNLTAALTAAITSIMGSTLPKNVNSDNNGNVTSGNNSGLNFFGS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral468g00009 517 MobiDBLite consensus disorder prediction 159 187 - -
Pral468g00009 517 MobiDBLite consensus disorder prediction 214 256 - -
Pral468g00009 517 SMART WRKY_cls 289 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral468g00009 517 FunFam probable WRKY transcription factor 31 274 351 - -
Pral468g00009 517 SUPERFAMILY WRKY DNA-binding domain 282 350 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral468g00009 517 ProSiteProfiles WRKY domain profile. 284 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral468g00009 517 MobiDBLite consensus disorder prediction 159 183 - -
Pral468g00009 517 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 92 501 IPR044810 GO:0003700
Pral468g00009 517 Gene3D WRKY domain 274 351 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral468g00009 517 Coils Coil 115 142 - -
Pral468g00009 517 MobiDBLite consensus disorder prediction 201 264 - -
Pral468g00009 517 Pfam WRKY DNA -binding domain 291 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral468g00009 Pral-Chr468 46735 49457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral468g00009 40 491 WRKY Transcription Factor Family AT1G62300 45.800 1.19e-104 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral468g00009 WRKY 5.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral468g00009 - - pcin:129313060 654.055