Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4689g00011 ATGAAGCACTTCCATCTCTTTCTCCCTACAACAACAAGCGGCAATATTATTGGAAAATTGTCACAAGTTAAATTCCAGGAGTTATTGGTCTATGATTTTGAAAAGGTTGCAATGGCTACAAACAACTTTCAATTGACCAATAAACTTGGGCAAGGCGGTTTTGGTCCTGTCTATAAGGGAACACTCCAAGATGGTCAGGATATAGCAGTTAAGAGATTATCAAGAGCATCTGGACAAGGACAAGAGGAATTCATGAATGAGATGATTGTCATTTCCAGGCTTCAACATCGTAATCTCGTAAAACTTTTAGGTTGTTGTATTGAAGGAGAAGAAAAGATGTTGATCTATGAGTACATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCCAGAGAAAAGCAAACTTCTAGACTGGGGAAAGCGTTTTGTCATTATTGAAGGAAGTAGAGTAGCTAGAGGAGTACTTTATCTTCATAGGGACTCTAGACTAAAAATTATACATAGGGACCTAAAGGCAAGTAATATCTTGCTAGATGAGAACTATTCAAAGATATCAGATTTTGGCATGGCTAGAATTTTCAAAGGAAGTGAAGATCAAGCTAACACAAGAAGAGTTGTCGGAACCTATGGCTATATGTCTCCAGAATATGCTATGGAAGTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTTTACTACTAGAGATTATAAGTGGAAGAAGAAACTCAAGCTTTTATAATAATGAGCACTCTCTTAGCCTTCTAGGATTTGCATGGAAATTATGGAATGAAGACATTGTAAAGCTAATAGACCCGAAAACATCTAATCAAAACCTGGAGAAGGATATATTGAGGTGCATACACATAGGACTTCTGTGTGTACAAGACCTTGCAATAGAGAGGCCAGGTATGAGCACTGTAGTTTCTATGCTTAATAGTGAGATTGTCAATCTTCCTCCTCCAAGGCAACCTGCGTTCATCCAATGGCAGAGTATATTGAATCAATTGACCCCAGAAGAGAATCAAAGATTATTTTCTAACAACGAAGTTAGTATTAGTGACATACAAGGCAGATAG 1083 0.3703 MKHFHLFLPTTTSGNIIGKLSQVKFQELLVYDFEKVAMATNNFQLTNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASGQGQEEFMNEMIVISRLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDAFIFDPEKSKLLDWGKRFVIIEGSRVARGVLYLHRDSRLKIIHRDLKASNILLDENLXSKISDFGMARIFKGSEDQANTRRVVGTYGYMSPEYAMEGXFSEKSDVFSFGVLLLEIISGRRNSSFYNNEHSLSLLGFAWKLWNEGXIVKLIDPKTSNQNLEKDILRCIHIGLLCVQDLAIERPGMSTVVSMLNSEIVNLPPPRQPAFIQWQSILNQLTPEENQRLFSNNEVSISDIQGR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4689g00011 363 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 119 324 - -
Pral4689g00011 363 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 340 - -
Pral4689g00011 363 FunFam receptor-like serine/threonine-protein kinase SD1-8 18 118 - -
Pral4689g00011 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pral4689g00011 363 ProSiteProfiles Protein kinase domain profile. 43 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4689g00011 363 SMART serkin_6 43 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4689g00011 363 CDD STKc_IRAK 49 317 - -
Pral4689g00011 363 Gene3D Phosphorylase Kinase; domain 1 12 118 - -
Pral4689g00011 363 SUPERFAMILY Protein kinase-like (PK-like) 28 346 IPR011009 -
Pral4689g00011 363 Gene3D Transferase(Phosphotransferase) domain 1 119 322 - -
Pral4689g00011 363 Pfam Protein tyrosine and serine/threonine kinase 44 262 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4689g00011 Pral-Chr4689 95765 97437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4689g00011 27 331 Receptor kinase-like Gene Family AT4G23230 57.049 9.62e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4689g00011 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4689g00011 - - pcin:129286414 544.273