LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4689g00005	ATGGCAACTGAAAGTGGTGACAATAAGCTAAAGCTGTATTCGTACTGGAGGAGCTCATGCGCCTTTCGAGTCCGAATTGCTCTCAACCTGAAAGGGATAAAATATGAGTACAAAGCAGTCAATTTGCTGAAGGGAGAACAGTCTGACCCTGATTTCCTGAAGCTCAATCCTGTTGGTTTTGTTCCCGTCCTCGTGGATGGGGACTTTGTGATTTCTGACTCTTTAGCCATCATTATGTATCTGGAGGATAAGTTTACTCAGCGTCCATTGCTTCCTCCTGATTTACAGAAAAGAACGATCAATTTTCAGGTTACGCATATTGTTTCCTCCAGTATACAGCCCTTGCAAAACATGACTGTATTGAGCTATATTGGCGAAAAAGTTAGCCCTGATGAAAAGCTTCCTTGGGTCCAAAGCGCTATACGAAAAGGTTTAACTGCTATTGAAAAACTATTGACAGGCCAGACAGGAAGATATGCTACTGGAGATGAAATTTTCCTGGCAGATTTGTTTTTAGCACCTCAATTAGTTGCTGCGAGAAGGTTCAATGTTGATATGACAGAGTTTCCCCTTCTAGCAAGATTGAGGGAATCTTACGATGAGGTCCCGGCAATCCAAGATGCTTCACCGGAGAACCAGCCGGATTCTCCCTCCCGAGGAACCTAG	666	0.4384	MATESGDNKLKLYSYWRSSCAFRVRIALNLKGIKYEYKAVNLLKGEQSDPDFLKLNPVGFVPVLVDGDFVISDSLAIIMYLEDKFTQRPLLPPDLQKRTINFQVTHIVSSSIQPLQNMTVLSYIGEKVSPDEKLPWVQSAIRKGLTAIEKLLTGQTGRYATGDEIFLADLFLAPQLVAARRFNVDMTEFPLLARLRESYDEVPAIQDASPENQPDSPSRGT	221

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4689g00005	221	CDD	GST_N_Zeta	10	82	IPR034333	-
	Pral4689g00005	221	MobiDBLite	consensus disorder prediction	202	221	-	-
	Pral4689g00005	221	FunFam	Glutathione S-transferase Z1	8	92	-	-
	Pral4689g00005	221	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	8	89	IPR004045	-
	Pral4689g00005	221	PANTHER	MALEYLACETOACETATE ISOMERASE	10	216	-	-
	Pral4689g00005	221	Gene3D	-	92	219	-	-
	Pral4689g00005	221	NCBIfam	maleylacetoacetate isomerase	11	216	IPR005955	GO:0003824\|GO:0005737\|GO:0009072
	Pral4689g00005	221	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	94	218	IPR010987	-
	Pral4689g00005	221	Pfam	Glutathione S-transferase, C-terminal domain	131	206	IPR004046	-
	Pral4689g00005	221	SFLD	Main (cytGST)	10	197	-	-
	Pral4689g00005	221	CDD	GST_C_Zeta	95	213	IPR034330	-
	Pral4689g00005	221	Pfam	Glutathione S-transferase, N-terminal domain	9	82	IPR004045	-
	Pral4689g00005	221	SFLD	Glutathione Transferase (cytosolic)	10	197	IPR040079	-
	Pral4689g00005	221	SUPERFAMILY	GST C-terminal domain-like	89	217	IPR036282	-
	Pral4689g00005	221	SUPERFAMILY	Thioredoxin-like	6	92	IPR036249	-
	Pral4689g00005	221	Gene3D	Glutaredoxin	7	91	-	-
	Pral4689g00005	221	FunFam	Maleylacetoacetate isomerase	93	219	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4689g00005	Pral-Chr4689	42230	54659	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4689g00005	9	218	Glutathione S-transferase Gene Family	AT2G02380	63.507	2.22e-98	283

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4689g00005	K01800		-	qsa:O6P43_034475	313.923