Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4689g00002 ATGTTTCCGAGACTAATACACCCTCATGAAAGCATAATCGAAGATTTGGAGGGTGCTTCGAACCACAACAATCACAAGGGCGACCCGTGTCTGGTTTTGACCGCCGATCCCAAGCCTCGCCTCCGGTGGACCCAGGACCTCCACGAACGATTCGTCGATGCTGTCACCCAGCTCGGGGGTGCCAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTCTTTCATTTAAAGAGCCATCTTCAGAAATACAGACTTGGTAAACAATCAGGGAAAGATATGGGTGAAGGATGCAAAGATGGGATGTCAGGCTCTTATCTTCTAGAAAGCCCGAGCACTGATAACAACTCTCCAAAGTTGCCAACTTCTGATGCAAATGAGGGTCATGAGATCAAAGAGGCGTTAAGAATTCAGATGGAAGTGCAGAGTAAACTTCATTTGCAAGTAGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCAGAGCGGCGGTACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATCAGTGCGACAATTATAGAGCCAGACAGCCAAAAAGTTCAAGATCTTGGAAGTAAAGCACCAAGAGGTTCCCTGCTTGATTCTCTAGGATTCTACTCCTTACCATCTGCCGAGGTGGCTGGAGTGCATGTTCCGGAGGGAAAAATCATGCCTAATTTCGAGCGTCCTAGGACTGGCTGTTCCACGGAAAGTTGCCTAACATCACATGAGAGTTCTAATGGGCTGGCTTCAGAAGGATCTCCAGATGGACTTAAAAAGAGGATGCTGAGCGTGGACCCTGTGGCCCCACCATTTATCTGGAATGAAGCCAAAATTAGAGTTCAAGACATCAATGTAGCCCAAGGTAATCTTCATGGAATAACCAGGTATGGCATGTAG 936 0.4744 MFPRLIHPHESIIEDLEGASNHNNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGMSGSYLLESPSTDNNSPKLPTSDANEGHEIKEALRIQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFISATIIEPDSQKVQDLGSKAPRGSLLDSLGFYSLPSAEVAGVHVPEGKIMPNFERPRTGCSTESCLTSHESSNGLASEGSPDGLKKRMLSVDPVAPPFIWNEAKIRVQDINVAQGNLHGITRYGM 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4689g00002 311 Pfam Myb-like DNA-binding domain 41 91 IPR001005 -
Pral4689g00002 311 MobiDBLite consensus disorder prediction 241 268 - -
Pral4689g00002 311 MobiDBLite consensus disorder prediction 112 129 - -
Pral4689g00002 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 261 IPR044848 GO:0003700
Pral4689g00002 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 95 IPR017930 -
Pral4689g00002 311 FunFam Myb family transcription factor 37 95 - -
Pral4689g00002 311 MobiDBLite consensus disorder prediction 243 264 - -
Pral4689g00002 311 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Pral4689g00002 311 Gene3D - 37 95 - -
Pral4689g00002 311 Pfam MYB-CC type transfactor, LHEQLE motif 136 181 IPR025756 -
Pral4689g00002 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
Pral4689g00002 311 MobiDBLite consensus disorder prediction 96 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4689g00002 Pral-Chr4689 16574 21216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4689g00002 15 273 G2-like Transcription Factor Family AT3G24120 44.280 4.63e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4689g00002 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4689g00002 - - gmx:100782369 487.648