Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4689g00001 ATGTTTCCGAGACTAATACACCCTCATGAAAGCATAATCGAAGATTTGGAGGGTGCTTCGAACCACAACAATCACAAGGGCGACCCGTGTCTGGTTTTGACCGCCGATCCCAAGCCTCGCCTCCGGTGGACCCAGGACCTCCACGAACGATTCGTCGATGCTGTCACCCAGCTCGGGGGTGCCAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTCTTTCATTTAAAGAGCCATCTTCAGAAATACAGACTTGGTAAACAATCAGGGAAAGATATGGGTGAAGGATGCAAAGATGGCTCTTATCTTCTAGAAAGCCCGAGCACTGATAACAACTCTCCAAAGTTGCCAACTTCTGATGCAAATGAGGGTCATGAGATCAAAGAGGCGTTAAGAATTCAGATGGAAGTGCAGAGTAAACTTCATTTGCAAGTAGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCAGAGCGGCGGTACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATCAGTGCGACAATTATAGAGCCAGACAGCCAAAAAGTTCAAGATCTTGGAAGTAAAGCACCAAGAGGTTCCCTGCTTGATTCTCTAGGATTCTACTCCTTACCATCTGCCGAGGTGGCTGGAGTGCATGTTCCGGAGGGAAAAATCATGCCTAATTTCGAGCGTCCTAGGACTGGCTGTTCCACGGAAAGTTGCCTAACATCACATGAGAGTTCTAATGGGCTGGCTTCAGAAGGATCTCCAGATGGACTTAAAAAGAGGATGCTGAGCGTGGACCCTGTGGCCCCACCATTTATCTGGAATGAAGCCAAAATTAGAGTTCAAGACATCAATGTAGCCCAAGGTAATCTTCATGGAATAACCAGGTATGGCATGTAG 927 0.4736 MFPRLIHPHESIIEDLEGASNHNNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGSYLLESPSTDNNSPKLPTSDANEGHEIKEALRIQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFISATIIEPDSQKVQDLGSKAPRGSLLDSLGFYSLPSAEVAGVHVPEGKIMPNFERPRTGCSTESCLTSHESSNGLASEGSPDGLKKRMLSVDPVAPPFIWNEAKIRVQDINVAQGNLHGITRYGM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4689g00001 308 Pfam Myb-like DNA-binding domain 41 91 IPR001005 -
Pral4689g00001 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 258 IPR044848 GO:0003700
Pral4689g00001 308 MobiDBLite consensus disorder prediction 111 126 - -
Pral4689g00001 308 MobiDBLite consensus disorder prediction 240 261 - -
Pral4689g00001 308 FunFam Myb family transcription factor 37 95 - -
Pral4689g00001 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 95 IPR017930 -
Pral4689g00001 308 MobiDBLite consensus disorder prediction 96 128 - -
Pral4689g00001 308 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Pral4689g00001 308 Gene3D - 37 95 - -
Pral4689g00001 308 MobiDBLite consensus disorder prediction 238 265 - -
Pral4689g00001 308 Pfam MYB-CC type transfactor, LHEQLE motif 133 178 IPR025756 -
Pral4689g00001 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4689g00001 Pral-Chr4689 16574 21216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4689g00001 15 270 G2-like Transcription Factor Family AT3G24120 45.387 4.09e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4689g00001 Myb_DNA-binding 5.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4689g00001 - - gmx:100782369 493.041