Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4688g00028 ATGGATTTCCTGAGTTATATGCTTTTGCTCATCTTCGTCATCTGCATCTTCGTTCAATTTCTGCGTTTGCCGAATGGAAGAAGCAACAGAAGAAACCGCAAGCTTCCTCCAGGTCCTACTCCTTTTCCCATAATCGGAAACCTCCTTGAATTAGGGCACAAGCCCCACAAGAGTTTGGCCAAGCTAGCCAATATTTACGGCCCAATCATGAGCTTACAGCTCGGCCGGGTCACCACCATAGTCGTTACTTCCGTCGACATGGCCAAGGGGGTACTTCTAACCCATGACCGGTTCTTGTCAAATCGAACCGTTCCTGACGCCGTGACAGCTCTCAACCACCATGAATATAGTTTGTCCTTTCTTCCCGTGTCCCCCCGTTGGCGAGCGTTAAGGAAGCTATGCAACAATCAGTTATTCGGCAACAAGGCTCTAGATGCGAGCCAAGATCTCAGGCGTAGCAAGGTGCAACAACTCATCAAGCAGGTCCATCAAAGCAGTGAGGTCGGTGAGGCCGTGGACATCGGAAAAGCGGCTTTCAAAACCTCAATCAACTTGTTGTCTAATAGTGTATTCTCCGTAGATTTGGTTGAGTCTGTAGATAAAACTGGGGAGTTCAAGGAGACAGTGGTCAATATCTTGAAAGAGATTGGAAGACCCAACGTAGCCGATTATTTTCCGATACTCAAGAAGATTGACCCACTGGGGGTCAGAAGTCGCACCACCATTCACGTCCGCAAGATGCTCGACGTCTTCCACCTCTTGGTTACTCAACGCTTGAAGCTCCGAGAAACAACAGGTTCACTCGCCAACAATGACATATTGGACGCCCTGCTTTCTGAAGAGAACAGGCAGGAGATGGATGGAGAGATGATCCAACGCTTATCACTGGACTTATTTGTGGCTGGGAGTGATACAACATCATCTACGCTGGAATGGGGAATGGCTGAGCTGCTCCGGAACCCAGAGGCAATGTCGAAAGCAAAAGCAGAGCTGGAGGAAACCATCGGGAAAGGAAAACCAGTGGAGGAGTCAGACGAAGCGAGACTGCCTTACTTGCAAGCAGTAGTGAAAGAGACGTTACGATTGCATCCTGCGGCTCCATTTTTACTGCCCAGGAAAGCAGAGATGGATGTGGAACTGGGGGGATACACAATCCCAAAGGGTGCACAAGTTCTGGTAAATGTTTGGGCCATAGGAAGAGATCAGAGCATATGGAAAAATCCAGAAGAGTTTTCGCCGGAGAGGTTTTTGGGCTCAGATATCGACGTCAAAGGCCGGGATTTTGAGCTGATTCCGTTTGGTGCTGGCCGGAGGGTTTGTCCGGGCTACCCTCTGGCTCTGAGAATGGTGTTCCTGGTGTTGGGTTCTCTGATAAATTGTTTTGACTGGAAGATGGAAGGTGGGACAAAGCCGGAGGACATGGACATGGATGATAAATTTGGAATTACCTTGGAGAAGGCTCAGCCGGTGCTCGTGGTTCCGTATAGAGCCAACAAGCGCCGTCACTGA 1509 0.4944 MDFLSYMLLLIFVICIFVQFLRLPNGRSNRRNRKLPPGPTPFPIIGNLLELGHKPHKSLAKLANIYGPIMSLQLGRVTTIVVTSVDMAKGVLLTHDRFLSNRTVPDAVTALNHHEYSLSFLPVSPRWRALRKLCNNQLFGNKALDASQDLRRSKVQQLIKQVHQSSEVGEAVDIGKAAFKTSINLLSNSVFSVDLVESVDKTGEFKETVVNILKEIGRPNVADYFPILKKIDPLGVRSRTTIHVRKMLDVFHLLVTQRLKLRETTGSLANNDILDALLSEENRQEMDGEMIQRLSLDLFVAGSDTTSSTLEWGMAELLRNPEAMSKAKAELEETIGKGKPVEESDEARLPYLQAVVKETLRLHPAAPFLLPRKAEMDVELGGYTIPKGAQVLVNVWAIGRDQSIWKNPEEFSPERFLGSDIDVKGRDFELIPFGAGRRVCPGYPLALRMVFLVLGSLINCFDWKMEGGTKPEDMDMDDKFGITLEKAQPVLVVPYRANKRRH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4688g00028 502 Pfam Cytochrome P450 36 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 495 - -
Pral4688g00028 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 SUPERFAMILY Cytochrome P450 29 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00028 502 FunFam Cytochrome P450 76C4 27 493 - -
Pral4688g00028 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Pral4688g00028 502 CDD CYP76-like 63 494 - -
Pral4688g00028 502 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4688g00028 Pral-Chr4688 126568 128676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4688g00028 1 496 Cytochrome P450 AT2G45550 48.323 1.60e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4688g00028 - - cave:132173603 652.899