Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4688g00027 ATGGATCTCATGAGTTGTATTCTCATGTCTGTCATCTGCTTCATCTTCATCCAAGCGCTTTGTTCGTTACATGGAACAAGCAGCAGAGGAAACCACCGCCTCCCTCCCGGACCTCCTCCTTTTCCTGTCATCGGAAACTTGCTTGCTCTTGGGAACAAGCCTCACAAGTGTTTGGCCGAGCTTGCCAAAACTTACGGCCCCATCATGAGTTTACAGCTCGGCCAAATCACCACCGTAGTCGTCTCTTCCGCCGATATGGCCAAAGGGATCCTCCTGACCCATGACCAGTTCTTGTCAAATCGAACCGTTCCCGACGCCATGAGAGCCGTCAACCACCACGAATATAGCTTGCCCTTCCTTCCCGTTTCCCCTCGCTGGCGATCCTTGAGGAAGTTATGCAACAGTCAGTTATTTGGCAGCAAGATTCTTGACGCTAGCCAAGATCTCAGGCGTCACAAGGTGCAACAGCTCCTCCAAGAGGTCGAACAAAGCAGTGTGACTGGTGAAGCAGTGGACATCGGAAAAGCGGCTTTCAAAACTACCATCAATTTGTTGTCCAATACAATATTCTCTGTGGATCTGGTTCGATCTGTAGGTTCAGCCGGGGAGTTCAGAGAGACGGTGGCCAATATCATGAAAGAGGTTGGAACGCCCAACGTGGCCGACTATTTTCCTATACTCAAGAAGCTCGATCCACTAGGTGTCAGAAGACGCACCGCTATTCATTTTAGCAAGATCTTAGACGTCTTCCACCACTTGGTTAGCCAACGGAAGAAGCTCATAGAAAACACAGGTTCACCCATCAGCAACGACATATTAGATGTTCTCCTTTCCGAAGAGAACAGAGAACAGATGGAAGGAGAGAGAATCCAACGTTTATCACTGGACCTATTTGCGGCCGGGAGTGATACGACGACATCTACGCTAGAATGGGGAATGGCTGAGCTACTCCATAACCCAAAGGCAATGTCAAAAGCAAAAGCAGAGCTGGAAGAAACCATAGGGAAAGGAAAACCAGTGGAAGAATCAGACATAGCGAGACTGCCTTACTTGCAGGCAGTACTGAAAGAGACGTTCCGGTTGCACCCAGCGGTTCCATTTTTACTGCCTAGGAAATCTGAGATGGACGTTGAGGTGGGGGGCTATATAATCCCAAAGGATGCACAAGTTCTGGTAAATGTTTGGGCTATCGGAAGAGATGCGAGCATATGGAAGAATCCGGAAGGGTTCTTACCAGAGAGGTTTTTGCGTTCAGAAATCGACGTCAAAGGCCGGAATTTTGAGCTGATTCCGTTTGGTGCTGGACGGCGGGTTTGTCCGGGCTACCCTCTGGCTCTGAGAATGGTGTTCCTGGTGTTGGGTTCTCTGATAAATTGTTTTGACTGGAAGATGGAAGGTGGGACAAAGCCGGAGGACATGGACATGGATGATAAATTTGGAATTACCTTGGAGAAGGCTCAGCCGGTGCTCGTGGTTCCGTATAGAGCCAACAAGCGCCGTCACTGA 1506 0.4934 MDLMSCILMSVICFIFIQALCSLHGTSSRGNHRLPPGPPPFPVIGNLLALGNKPHKCLAELAKTYGPIMSLQLGQITTVVVSSADMAKGILLTHDQFLSNRTVPDAMRAVNHHEYSLPFLPVSPRWRSLRKLCNSQLFGSKILDASQDLRRHKVQQLLQEVEQSSVTGEAVDIGKAAFKTTINLLSNTIFSVDLVRSVGSAGEFRETVANIMKEVGTPNVADYFPILKKLDPLGVRRRTAIHFSKILDVFHHLVSQRKKLIENTGSPISNDILDVLLSEENREQMEGERIQRLSLDLFAAGSDTTTSTLEWGMAELLHNPKAMSKAKAELEETIGKGKPVEESDIARLPYLQAVLKETFRLHPAVPFLLPRKSEMDVEVGGYIIPKDAQVLVNVWAIGRDASIWKNPEGFLPERFLRSEIDVKGRNFELIPFGAGRRVCPGYPLALRMVFLVLGSLINCFDWKMEGGTKPEDMDMDDKFGITLEKAQPVLVVPYRANKRRH 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4688g00027 501 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 CDD CYP76-like 62 493 - -
Pral4688g00027 501 Pfam Cytochrome P450 35 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 494 - -
Pral4688g00027 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Pral4688g00027 501 FunFam Cytochrome P450 76C4 26 492 - -
Pral4688g00027 501 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4688g00027 501 SUPERFAMILY Cytochrome P450 35 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4688g00027 Pral-Chr4688 126568 134005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4688g00027 1 495 Cytochrome P450 AT2G45550 47.431 1.20e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4688g00027 - - cave:132173603 642.884