Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4688g00011 ATGGGTTCCCAACAGAACGATGGCACAAGCTACGCGCCGTCGGAGCCGAAGCCATGCGCCAACAACTGTGGATTCTTTGGCACCGCCGGCACCATGAACCTTTGCTCTAAATGTTACAGAGACTTCCAAATCAAAGAGCAGCAGGCCGCCTCCGCTAAAGCCGCCATGGAGAAATCACTCAACCCTAGATCCGCTCCCTTACCTCATCAGACCCGGGAAACCGACCCCACAGCGCAGTTCCTTTTTGGAACTCCTTCGGAAGCATCGTCTTCATCGTCCGCGGTTCTCGGTGGCGATCAAGGGCAGCCAAAGGCGGCGAACCGATGTAGCAGTTGTAACAAGAAGGTAGGGTTGACTGGATTCCCGTGCAAGTGTGGGAGCACTTTCTGCGGGGCACATCGATATCCGGAGAAGCACGAGTGTACATATGACTTCAAGGTTTCTGGCCGTGATGCGATTGCCAAGGCTAATCCGGTGGTGAAAGCCCCAAAACTAGACAAGATTTAG 507 0.5424 MGSQQNDGTSYAPSEPKPCANNCGFFGTAGTMNLCSKCYRDFQIKEQQAASAKAAMEKSLNPRSAPLPHQTRETDPTAQFLFGTPSEASSSSSAVLGGDQGQPKAANRCSSCNKKVGLTGFPCKCGSTFCGAHRYPEKHECTYDFKVSGRDAIAKANPVVKAPKLDKI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4688g00011 168 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Pral4688g00011 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Pral4688g00011 168 MobiDBLite consensus disorder prediction 64 104 - -
Pral4688g00011 168 MobiDBLite consensus disorder prediction 50 104 - -
Pral4688g00011 168 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Pral4688g00011 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 168 - -
Pral4688g00011 168 Gene3D - 2 63 - -
Pral4688g00011 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Pral4688g00011 168 SUPERFAMILY AN1-like Zinc finger 101 163 IPR035896 -
Pral4688g00011 168 Gene3D - 84 164 IPR035896 -
Pral4688g00011 168 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Pral4688g00011 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 68 - -
Pral4688g00011 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Pral4688g00011 168 FunFam Zinc finger AN1-type containing 6 85 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4688g00011 Pral-Chr4688 63715 65422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4688g00011 13 168 C2H2 Transcription Factor Family AT3G52800 46.584 8.07e-40 131