Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4688g00009 ATGGATCCGATGGCAGGGCATGGGCACTCTCTTCCTCCACCATTCCATATGCACCAGCAGTCCCAGCATGAGCATCAATTTCAGTCTCTACACCAAAACACAGAAGAGGAACAAAGCGGAAGCAGCAGTGGCCTAAACCTCGCCCACAAGAGAGAACGCGAAGAAACCAGCTACAATAACAACAACGATCAAGGCAATATGAACGGAGAAGGTGGTGGCGAAATGACGAGAAGGCCTCGAGGCAGACCCTCCGGATCCAAGAACAAACCCAAACCACCCATCATCATAACCCGAGACAGTGCGAATGCCCTTAGAACCCACGTCATGGAGGTAGCTGACGGCTGTGACATCGTCGAAAGCGTGTCCAGCTTCGCCAGGCGACGCCAGAGAGGGGTTTGTATTATGAGCGGCACCGGCACCGTCACCAATGTCACTTTGAGGCAACCCGCTTCTTCCGGTGCTGTCGTCACTCTTCACGGAAGGTTCGAGATCTTGTCACTCGCTGGCTCCTTCTTGCCGCCACCGGCTCCACCCGCCGCATCCGGTTTGACCATATATTTGGCTGGCGGGCAAGGTCAGGTGGTCGGGGGAACCGTAGTAGGAGCGCTTATGGCTGCGGGACCGGTGGTGATCATGGCGGCTTCGTTTAGCAACGCTGCTTACGAGAGACTTCCTTTGGAGGAAGAAGACCCATCGGCGGCGATTCAAGGTCCTCCCGGAATTGGGTCACCAGGTGGGGTTGGTCAGCAACAGCCGCTATTAGGGGACACAACATCGCCACTCATGCATGCTTTGCCTCCTAATCTTCTCAATTCTATGCAGATGCCTTCTGATCAGCCTTTCTGGGCCACTGCTCGTCCTCCATTCGGATGA 873 0.5533 MDPMAGHGHSLPPPFHMHQQSQHEHQFQSLHQNTEEEQSGSSSGLNLAHKREREETSYNNNNDQGNMNGEGGGEMTRRPRGRPSGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVESVSSFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGTVVGALMAAGPVVIMAASFSNAAYERLPLEEEDPSAAIQGPPGIGSPGGVGQQQHXLLGDTTSPLMHALPPNLLNSMQMPSDQPFWATARPPFG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4688g00009 291 CDD DUF296 105 172 IPR005175 -
Pral4688g00009 291 MobiDBLite consensus disorder prediction 1 95 - -
Pral4688g00009 291 FunFam AT-hook motif nuclear-localized protein 104 231 - -
Pral4688g00009 291 MobiDBLite consensus disorder prediction 231 260 - -
Pral4688g00009 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 230 - -
Pral4688g00009 291 PIRSF ESCAROLA 16 290 IPR014476 GO:0003680
Pral4688g00009 291 ProSiteProfiles PPC domain profile profile. 101 238 IPR005175 -
Pral4688g00009 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 284 IPR014476 GO:0003680
Pral4688g00009 291 MobiDBLite consensus disorder prediction 15 46 - -
Pral4688g00009 291 Gene3D - 104 232 - -
Pral4688g00009 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 218 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4688g00009 Pral-Chr4688 57483 59504 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4688g00009 1 290 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 55.927 1.94e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4688g00009 - - gmx:100781436 393.66