Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4688g00005 ATGGAAGCAAGGGATGGAATTGGCAGTGCAGTCACGGTGGTGGGATCAGATGATCCATCGGAGTACCATGTAGCTCCCCGGACGGAGAACCCAGCAACGACTGGCGGATCAACAACGCCTGCGCCGGCTCCGCCGGCTCAAGGGAGTGCTCGTCCGCCACAGACGGCAGCGGCGGGAGGTACCCCGACAACCATGATGATGCCGGGGAAGAAGAAAAGAGGCCGACCGAGAAAGTACGGACCAGACGGGTCGGTGACCATGGCTCTGTCTCCTAAACCAATATCATCTTCGGCTCCACCCCAAGTCATCGATTTCTCCGCAGATAAGCGCGGGAAAGTGCGTCCAGCTAGTTCGGTCAGCAAATCCAAATTCGAGGTCGAGAATTTAGGTGAATGGGTTGCATGCTCTGTAGGTGCTAATTTTACACCCCACATAATCACTGTTAATGCTGGGGAGGACGTTACTATGAAGATAATATCATTTTCTCAGCAAGGACCTCGAGCTATATGTATTCTTTCTGCAAATGGTGTCATATCAAGTGTCACACTTCGTCAACCTGACTCTTCTGGGGGCACATTGACCTATGAGGGACGTTTTGAAATTCTGTCGTTGTCTGGGTCGTTCATGCCAAGTGAAAGTGGGGGAACACGGAGCAGATCTGGCGGCATGAGCGTTTCTTTGGCGAGTCCAGATGGTCGTGTTGTAGGTGGCGGTGTGGCAGGTCTTTTAGTAGCAGCAAGTCCCGTGCAGGTAGTGGTAGGAAGCTTTCTGGCTGGAAACCAGCATGAGCAGAAACCAAAGAAACAGAAAATTGAGGTGATATCCACAGCCATACCAACCGCTGTTGTTCCCTTGTCTGCTGTCACTGATCCAGTCCCTCTCCTCACCTCTCCGTCTTCCTTCCGCGGTGAAAATTGGTCCACAATTCCGGCAGATAACCGGAATAACACCACCACCAACGCCAACACCAACAATAATACTAATGGTAATAATGATAATAATAATAAGCCAGCTGATATTAATGTGTCATTGTCTGGAGGGTAA 1044 0.5077 MEARDGIGSAVTVVGSDDPSEYHVAPRTENPATTGGSTTPAPAPPAQGSARPPQTAAAGGTPTTMMMPGKKKRGRPRKYGPDGSVTMALSPKPISSSAPPQVIDFSADKRGKVRPASSVSKSKFEVENLGEWVACSVGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKIEVISTAIPTAVVPLSAVTDPVPLLTSPSSFRGENWSTIPADNRNNTTTNANTNNNTNGNNDNNNKPADINVSLSGG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4688g00005 347 CDD DUF296 142 233 IPR005175 -
Pral4688g00005 347 MobiDBLite consensus disorder prediction 1 85 - -
Pral4688g00005 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 38 326 IPR039605 GO:0003680
Pral4688g00005 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Pral4688g00005 347 MobiDBLite consensus disorder prediction 299 347 - -
Pral4688g00005 347 FunFam AT-hook motif nuclear-localized protein 1-like 143 273 - -
Pral4688g00005 347 Gene3D - 143 276 - -
Pral4688g00005 347 MobiDBLite consensus disorder prediction 30 44 - -
Pral4688g00005 347 ProSiteProfiles PPC domain profile profile. 138 277 IPR005175 -
Pral4688g00005 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4688g00005 Pral-Chr4688 22034 26313 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4688g00005 11 345 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 59.718 3.22e-122 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4688g00005 - - qsa:O6P43_024280 433.721