Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4687g00008 ATGAAGATAATATCATTTTCTCAGCAAGGACCTCGAGCTATATGTATTCTTTCTGCAAATGGTGTCATATCAAGTGTCACACTTCGTCAACCTGACTCTTCTGGGGGCACATTGACCTATGAGGGACGTTTTGAAATTCTGTCGTTGTCTGGGTCGTTCATGCCAAGTGAAAGTGGGGGAACACGGAGCAGATCTGGCGGCATGAGCGTTTCTTTGGCGAGTCCAGATGGTCGTGTTGTAGGTGGCGGTGTGGCAGGTCTTTTAGTAGCAGCAAGTCCCGTGCAGGTAGTGGTAGGAAGCTTTCTGGCTGGAAACCAGCATGAGCAGAAACCAAAGAAACAGAAAATTGAGGTGATATCCACAGCCATACCAACCGCTGTTGTTCCCTTGTCAGCTGTCACTGATCCAGTCCCTCTCCTCACCTCTCCGTCTTCCTTCCGCGGCGAAAATTGGTCCACAATTCCGGCAGATAACCGGAATAACACCACCACCAACGCCAACACCAACAATAATACTAATGGTAATAATGATAATAATAATAAGCCAGCTGATATTAATGTGTCATTGTCTGGAGGGTAA 579 0.4698 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKIEVISTAIPTAVVPLSAVTDPVPLLTSPSSFRGENWSTIPADNRNNTTTNANTNNNTNGNNDNNNKPADINVSLSGG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4687g00008 192 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 105 - -
Pral4687g00008 192 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 101 IPR005175 -
Pral4687g00008 192 Gene3D - 1 122 - -
Pral4687g00008 192 MobiDBLite consensus disorder prediction 144 192 - -
Pral4687g00008 192 CDD DUF296 2 78 IPR005175 -
Pral4687g00008 192 ProSiteProfiles PPC domain profile profile. 1 122 IPR005175 -
Pral4687g00008 192 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 171 IPR039605 GO:0003680
Pral4687g00008 192 FunFam AT-hook motif nuclear-localized protein 1-like 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4687g00008 Pral-Chr4687 43223 45400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4687g00008 1 169 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 70.930 2.15e-73 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4687g00008 - - gmx:100794202 248.054