Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00165 ATGGGGCGGCAACCTTGCTGTGACAAACTGGGCGTGAAGAAAGGACCATGGACTGCAGAGGAAGACAAGAAACTCATCAACTTCATTCTCACCAATGGCCAGTGCTGTTGGCGAGCCGTCCCCAAGCTCGCCGGCCTCCGCCGCTGTGGTAAGAGTTGCCGCCTTCGTTGGACTAATTATCTTCGTCCCGACTTGAAGCGAGGACTTCTCACTGAAGCTGAAGAGCAGCTCGTTATCGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCCAGATTACCTGGAAGGACAGACAATGAGATTAAGAATCACTGGAACACTCACATCAAGAAAAAGCTGCTTAAGATGGGGATTGATCCTGTTACTCATGAACCGCTTAATAAACAGGCTGCCTCCCAGGAAACATCTTCCCATCAGAATAATCCACAATCTGCAAATAATAATCAGCTTAAGGAAAGTGAGGGGGTTCCCAACTCTGAGGAGAATTCGAGCACATCCCCGGTTGAAAACTCTTCCGGGGACGAGTCCCTTCTGTTAGACAGTATTTGCAGCGATGAATCTCTAATGAACAGCTTGTGGCTGGACGAAACACCACTGGTGGATGCATTATGGGACAGTGAACCTAAAGTGCAGAATACCACTAATAATAATGACATGGCCATGCCATCTTGGGAGGACAACTGTGCTTGGTTTTTGGACTGTCAGGACTTTGGTATTCATGATTTTGGTTTTAATTGTTTTAATGAGATTGAGTCAAACGCGCTGCAAACTTTAGGAATCGAGGGAAAGGATCGTTAG 807 0.4746 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKQAASQETSSHQNNPQSANNNQLKESEGVPNSEENSSTSPVENSSGDESLLLDSICSDESLMNSLWLDETPLVDALWDSEPKVQNTTNNNDMAMPSWEDNCAWFLDCQDFGIHDFGFNCFNEIESNALQTLGIEGKDR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00165 268 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral4686g00165 268 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4686g00165 268 FunFam MYB transcription factor 11 67 - -
Pral4686g00165 268 CDD SANT 16 61 IPR001005 -
Pral4686g00165 268 Gene3D - 12 67 - -
Pral4686g00165 268 MobiDBLite consensus disorder prediction 130 178 - -
Pral4686g00165 268 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4686g00165 268 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4686g00165 268 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Pral4686g00165 268 Gene3D - 71 157 - -
Pral4686g00165 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral4686g00165 268 FunFam MYB transcription factor 70 147 - -
Pral4686g00165 268 CDD SANT 71 112 IPR001005 -
Pral4686g00165 268 SMART sant 13 63 IPR001005 -
Pral4686g00165 268 SMART sant 66 114 IPR001005 -
Pral4686g00165 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral4686g00165 268 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00165 Pral-Chr4686 786998 788878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00165 1 260 MYB Transcription Factor Family AT4G12350 59.649 9.77e-105 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4686g00165 Myb_DNA-binding 2.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00165 K09422 - gmx:100786965 464.536