Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00159 ATGACCTTGAACCATCACTTCCTCGCCGTGACATATCATATCCTTTCATTCTTTTGCATCTCTAGGGTAAGTGTTCCTTGCACTAGCTTGTTCAAGACGGTGACGGTGCGGTGCGGCCATTGCACCAACCTCCTGCCAGTTAACGTTAACGTTAACGTGCGTGGATTGCTTCTTCCTTCGGCAAACCAATTTCACTTGAGTCACTCTTTCTACTCTCCATCTCACAATCTTCTGGAGGCGATACCAAACCCATCCCCTAACTTCCTAATCAATCAGACCAACTCTTCCAATGACTTCTCTATGCCTTCAAGGACAACAGCCGATGAGCTACCACGCCCACCCCTTATCAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCCTACAACCGATTCATTAAGGAGGAGATCCAACGCATCAAGTCTATCAATCCAGATATAACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAACTGGGCCCACTTCCCTCACATTCACTTTGGCCTCATGCCTGATCAGACTATGAAGAAGACAAATGTGCGCCAGCAGGAAGGCGAGGACGTTCATATGAAAGATGGGTTTTTTGCTTCGGCTAATGATGGTGTTTCTCCCTACTAG 624 0.484 MTLNHHFLAVTYHILSFFCISRVSVPCTSLFKTVTVRCGHCTNLLPVNVNVNVRGLLLPSANQFHLSHSFYSPSHNLLEAIPNPSPNFLINQTNSSNDFSMPSRTTADELPRPPLINRPPEKRQRVPSAYNRFIKEEIQRIKSINPDITHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTNVRQQEGEDVHMKDGFFASANDGVSPY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00159 207 FunFam Axial regulator YABBY 116 187 - -
Pral4686g00159 207 CDD HMG-box_SF 125 161 - -
Pral4686g00159 207 SUPERFAMILY HMG-box 115 164 IPR036910 -
Pral4686g00159 207 Pfam YABBY protein 20 171 IPR006780 GO:0007275
Pral4686g00159 207 PANTHER PROTEIN YABBY 6-RELATED 21 183 IPR006780 GO:0007275
Pral4686g00159 207 MobiDBLite consensus disorder prediction 92 124 - -
Pral4686g00159 207 Gene3D High mobility group box domain 116 189 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00159 Pral-Chr4686 745931 748319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00159 22 205 C2C2-YABBY Transcription Factor Family AT4G00180 58.537 8.96e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pral4686g00159 YABBY 4.1e-56 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00159 K25796 - jre:109011373 322.013