Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00158 ATGTCATCATCCTCTTCAACTGCCTTATCGCTGGACCACCTCCCTCCTTCCGAGCAGCTTTGTTATGTCCACTGCAACATTTGTGACACTGTCCTCGCCGTAAGTGTTCCTTGCACTAGCTTGTTCAAGACGGTGACGGTGCGGTGCGGCCATTGCACCAACCTCCTGCCAGTTAACGTTAACGTTAACGTGCGTGGATTGCTTCTTCCTTCGGCAAACCAATTTCACTTGAGTCACTCTTTCTACTCTCCATCTCACAATCTTCTGGAGGCGATACCAAACCCATCCCCTAACTTCCTAATCAATCAGACCAACTCTTCCAATGACTTCTCTATGCCTTCAAGGACAACAGCCGATGAGCTACCACGCCCACCCCTTATCAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCCTACAACCGATTCATTAAGGAGGAGATCCAACGCATCAAGTCTATCAATCCAGATATAACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAACTGGGCCCACTTCCCTCACATTCACTTTGGCCTCATGCCTGATCAGACTATGAAGAAGACAAATGTGCGCCAGCAGGAAGGCGAGGACGTTCATATGAAAGATGGGTTTTTTGCTTCGGCTAATGATGGTGTTTCTCCCTACTAG 657 0.4947 MSSSSSTALSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNVNVNVRGLLLPSANQFHLSHSFYSPSHNLLEAIPNPSPNFLINQTNSSNDFSMPSRTTADELPRPPLINRPPEKRQRVPSAYNRFIKEEIQRIKSINPDITHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTNVRQQEGEDVHMKDGFFASANDGVSPY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00158 218 MobiDBLite consensus disorder prediction 102 136 - -
Pral4686g00158 218 PANTHER PROTEIN YABBY 6-RELATED 1 194 IPR006780 GO:0007275
Pral4686g00158 218 CDD HMG-box_SF 136 172 - -
Pral4686g00158 218 Pfam YABBY protein 16 182 IPR006780 GO:0007275
Pral4686g00158 218 Gene3D High mobility group box domain 127 200 IPR036910 -
Pral4686g00158 218 FunFam Axial regulator YABBY 127 198 - -
Pral4686g00158 218 SUPERFAMILY HMG-box 126 175 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00158 Pral-Chr4686 745931 748614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00158 27 216 C2C2-YABBY Transcription Factor Family AT4G00180 57.820 6.83e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pral4686g00158 YABBY 3.8e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00158 K25796 - vvi:100267708 381.333