Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00154 ATGGACTTGAAGTCGTCCCATGTATCTCCTGTCCTAACAGACCCTGTTCCTGTGAACAAGTCAAGACTGGGAATCCACTCTAGTGTGTTAAGTTACTCGCAGCCGGATCCTCCCTCTAGTACTCCAGGCAAGTACACAAGGACCAGTTCGAGAAAAAGTCCTGGCAATCTTGATGATGTACGCTCCAATGGATGGCTAGACGCCATGAAGGCCTCCTCGCCCCCGAGGAAGAAGCTAGTTAAGGGTTCTAATAACACTCAGGTCACTCATTTTGACTCTGACAGTGAGGACTATCACTCCTGGATGCGAGAGTACCCATCCGCACTGGACGCTTTTGACGACCTTGTTGACCGTGCAAAGGATAAGAAGATTGCAATGTTTCTAGATTATGATGGGACTCTTTCCCCTATAGTGGACGATCCAGATTCTGCCTTTATGTCCGAAGCTATGCGGGCAACGGTGAGAAGTGTGGCGAAGTATTTTCCCACGGCAATCATTAGTGGAAGAAGCCGTGATCAGGTTTTTGATTTGGTAAAATTAACGGAACTCTACTATGCTGGAAGTCATGGGATGGACATCATTGGCCCAGCCCGTGAAGCTTTGTTCAATAACCATCCAAATTGCGTGAAATCTACTGATCATCAGGGAAAGGAAATAACTCTGTTTCAACCCGCAAAAGAATTCCTGCCTATGATCGACAAGGTTTTTAGAACCCTCGTCGAGATAACTAGAGATATCAAGGGCGCAAAGGTTGAAAATCACAAGTTTTGCGCCTCTGTACATTATCGTAATGTGGATGAGAATAATTGGATAACTGTCGGACAACTTGTCCACGACATGTTAAAAAACTACCCACGCTTGCGTTCAACTCACGGACGCAGGGTTTTAGAGGTGCGTCCGGCGATTGATTGGAACAAAGGAAAAGCAGTTGAGTTTTTACTCGAGTCTCTAGGGTTTAGTGATAGGGATGATGTGATCGCGATCTACATTGGGGATGACAAGACGGACGAAGATGCATTTAAGGTGTTGCGGGAGAACAAGAGAGGATATGGCATTCTGGTGTCGCCGGTGAAGAAAGAGAGCAACGCCTTTTACTCTCTGAGGGACCCCTCGGAAGTCATGAAATTTCTGCAGATGCTGCTCAGTTGGAAGAGGCAACAAGACGACGACCCGAAGCGATCCCCCGCTCTTGGCGCTTCGTTTTGA 1206 0.4718 MDLKSSHVSPVLTDPVPVNKSRLGIHSSVLSYSQPDPPSSTPGKYTRTSSRKSPGNLDDVRSNGWLDAMKASSPPRKKLVKGSNNTQVTHFDSDSEDYHSWMREYPSALDAFDDLVDRAKDKKIAMFLDYDGTLSPIVDDPDSAFMSEAMRATVRSVAKYFPTAIISGRSRDQVFDLVKLTELYYAGSHGMDIIGPAREALFNNHPNCVKSTDHQGKEITLFQPAKEFLPMIDKVFRTLVEITRDIKGAKVENHKFCASVHYRNVDENNWITVGQLVHDMLKNYPRLRSTHGRRVLEVRPAIDWNKGKAVEFLLESLGFSDRDDVIAIYIGDDKTDEDAFKVLRENKRGYGILVSPVKKESNAFYSLRDPSEVMKFLQMLLSWKRQQDDDPKRSPALGASF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00154 401 Gene3D - 224 395 IPR023214 -
Pral4686g00154 401 Gene3D - 124 212 IPR023214 -
Pral4686g00154 401 FunFam Trehalose 6-phosphate phosphatase 231 390 - -
Pral4686g00154 401 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 31 389 IPR044651 GO:0004805|GO:0005992
Pral4686g00154 401 MobiDBLite consensus disorder prediction 1 20 - -
Pral4686g00154 401 Pfam Trehalose-phosphatase 127 371 IPR003337 GO:0003824|GO:0005992
Pral4686g00154 401 MobiDBLite consensus disorder prediction 27 57 - -
Pral4686g00154 401 MobiDBLite consensus disorder prediction 71 90 - -
Pral4686g00154 401 MobiDBLite consensus disorder prediction 27 63 - -
Pral4686g00154 401 NCBIfam trehalose-phosphatase 122 381 IPR003337 GO:0003824|GO:0005992
Pral4686g00154 401 NCBIfam HAD-IIB family hydrolase 126 344 IPR006379 -
Pral4686g00154 401 CDD HAD_TPP 125 375 - -
Pral4686g00154 401 SUPERFAMILY HAD-like 125 384 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00154 Pral-Chr4686 711091 715198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00154 120 380 Trehalose Biosynthesis Gene Families AT1G70290 26.812 1.02e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00154 K01087 - qsa:O6P43_024315 576.244