Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00127 ATGCAGTTGGAACAAAAAGAACTGGGAAACAGGGGAGTTGACAGCTTAAATGGTTATCCTGGTGATGTTAACCCAATAGAAGCTTTCAGAGATTACAATTTGCTTTCAGGCAGCCGGCAGGAATCTCTGGTGGAGTGGATAAATAGTGTGCTTCCTCACTTAAATCTGCCTATAGAAACTTCAGAGGAGGAACTAAGGGCATTGCTGAGGGATGGATCTGTATTATGCAGCATTTTGGACAAGCTGATTCCTGGTTCAGTGGAAGTAGCCATGGATGAGCTGGGATTGCCTGGATTTGATTTGTCAAGGCTAGAGCAGGGATCGGTAGGGCCTGTATTGCAGTACCTTGAGGGTTTGAAAACTCATTTTGCTTCAAATGTTAAGAGAGAACATATCCAAAAGCTTTCCAGAAAGAGGTGGGATCAATCAGATCTAGCATACTTGGCCCATGGGAGTGAAGAGAGGCTAAAATTTTCTGGTGATTCAAATTTCGAACATGAAGTTGAGGGTTCTGTCCTATCAGATGAAGCACATTATGTTGGATCTAAGTCTAAAGAACTCTTACAGTTGAAACGAGGATGGCATGTGGATCTTTCTGATGAAAAAATTATGGAATTACTCAAATCAAACAGTTTAGATAATGCTTCGACTCAGACGCTTTTTAACATAGGAAATAGGATTATGGATGATATCTTTGGAAGAAAGAATGGAGATGTGCCTCAATCTCAGCATGCAGCATTCCTGTTGAGAAAAATTCTTCAAGTGATAGAGTGGCGTTTTTCTAATCAAGCGGAAAGCCTGAAAAATCAAAACAGTCTTTTCAAGGTTCGTGAAGGGAAGTACCAACTGAAAATAAATGCACTTGAAACTCTGGCAACAGGAACAACTGAAGAGAGTGAGGTTGTCAAAAGTTGGTTACAGCAGTTGAAGTTTGCTCTTCAAGTTGAGAAAACTAAAATGGAGGAGAAAAACAAACTTGATGAGCAGGATGTTGCTCGTTTAAAACAAGAAAAAGTTCATGCTGAAATTGAGATTTCTGCGTTAAAGCAAGAATTGGAAATGGTCAAAAAAGCACATGAAGAGCTCCGTATGCAATCAGAATTATGTGCTGAAGAATGCAAATCTGAATACGAGAAGAGGATATGGGAACTAGAACGTGGTCTTGCTGATGCAGGGAATCAAGCCAACAAATTGGAGGCACTTATGGAATCTAAATCTCTTAGATGGAAGAACAAAGAGAATACCTATCAAAGTTTCATTAACCACCAATTCGGAGCATTCAAGGACTTGAGAGCTGCGATGGAATCTGTAAAAGATGATGTGCTGAAAACAAAAAGAAGCTACTCAGAAGAATTCAAGTATTTGGGGATGAAGCTCAAGAGTCTAGCTGAAGCTGCTGAAAATTATCATGTAGTTCTAACAGAAAATCGGAAATTATATAACGAAGTTCAAGACTTGAAAGGAAATATCCGGGTATATTGTCGAATAAGACCCTTTCTTCCGGGGCAAAGTCAAAACCAGACAACCATTGAATTGATTGGTGATAATGGAGAATTAGTTGTCAGCAATCCTCTCAAACAAGGAAAAGAGAGTCGTAAGCTTTTTAAATTCAACAAGGTTTTTGGTCCAACAGCAAGTCAAGAAGAAGTTTTCATGGACACCCAACCACTAATTCGTTCTGTACTTGACGGGTACAATGTCTGCATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACATATACAATGAGTGGACCTAGCCTATCGTCAAAATCAGACTGGGGAGTCAATTATCGAGCGCTACATGATCTTTTCCATATTTCCCAAAGTAGAAAAGGCTCTATAGTTTATGAAGTTGGTGTTCAAATGGTTGAGATTTATAATGAACAAGTTCGTGATTTACTATCTACAAATGGTCCTCAAAAAGTTGGGATTTGGAATTCTGCCCAACCAAATGGGTTGGTTGTTCCTGATGCAAGCTTGCATACTGTGAATTCAATGACGGATGTGCTGGAGTTGATGAACATTGGACTAATGAATCGGGTAACTGGTTCCACAGCCTTAAATGAAAGAAGTAGCAGATCACATAGTGTTCTTACTGTTCATGTTCGTGGCACGGATTTGGAGACCAACACTTTATTGCGTGGATGTCTACATCTTGTAGATCTTGCAGGGAGTGAGAGAGTAGAGCGCTCTGAAGCCACAGGAGATAGGCTTAAGGAGGCACAACATATAAATAAATCACTATCAGCACTTGGAGATGTGATTTCTGCTCTAGCACAAAAGAGTCCACATGTTCCTTATAGAAATAGTAAATTGACTCAACTTCTTCAAAGTTCGTTAGGTGGTCAAGCAAAAACCCTCATGTTTGTACAGCTTAACCCTGACACTGCTTCGTATTCTGAAACGATAAGCACCTTGAAGTTTGCCGTGAGGGTTTCAGGTGTTGAGCTGGGTGCTGCTCGTAGTAATAGAGAGGGAAGGGATGTCAAAGAACTCTTAGAACAGGTAACATCCCTCAAAGATGCACTTGCTAGGAAGGATGAAGAGATTGAGCGGTTGCAGCAGCTCAGGACAAATCTCAGTGTTGCTAAACGTGGGATGATGAGGTATGCGTCATCATCTCCACGGAGACATTCCACTGGAACTTCGAGGCATAGCACAAGACTTTCTGGAGCTGGGGCCTTGCGAGTTGGTGAAAAAGCAACTTCTGACATGGACAACTGCTCAGAGTATAGTGATAAGCATTCGGAAACTGGTTCTCATCAGTCAATGGACGATCTCAGGAACAAGCCCAGTTCCCCCCTGTTCAAATCATCCAAAGAAGATACAAGTCAGAATGTCAATGACGACATTGATCTCTTGGGATTTGGAGAGGCAGATTCTGAAGAGAGATTAAGTGATATATCTGACGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCTGCAGCATTGTGGAGTACACTCTCTTCCCGGAAGCGGAGAAGCCAGCTGAAACTACCCCAAGTAAGAGCACAACAACAGACAACCTGTCAGCTGCAAACAAAGAGAAATCCACTGTGGCGTCCAAAATTCCCAAAGCCGCAGAAGTTCTACAAAAGGTACCAACAAGATCTTCCAGGTTATCGATGAATAGAAGTTCCTCAAAGGTTTCCTCAAGCATCAAGAAGACGGCTACCGGTAGCTCAACTTCAGTGAAGGCCCCTCCTAAACGATGGCAATGA 3231 0.416 MQLEQKELGNRGVDSLNGYPGDVNPIEAFRDYNLLSGSRQESLVEWINSVLPHLNLPIETSEEELRALLRDGSVLCSILDKLIPGSVEVAMDELGLPGFDLSRLEQGSVGPVLQYLEGLKTHFASNVKREHIQKLSRKRWDQSDLAYLAHGSEERLKFSGDSNFEHEVEGSVLSDEAHYVGSKSKELLQLKRGWHVDLSDEKIMELLKSNSLDNASTQTLFNIGNRIMDDIFGRKNGDVPQSQHAAFLLRKILQVIEWRFSNQAESLKNQNSLFKVREGKYQLKINALETLATGTTEESEVVKSWLQQLKFALQVEKTKMEEKNKLDEQDVARLKQEKVHAEIEISALKQELEMVKKAHEELRMQSELCAEECKSEYEKRIWELERGLADAGNQANKLEALMESKSLRWKNKENTYQSFINHQFGAFKDLRAAMESVKDDVLKTKRSYSEEFKYLGMKLKSLAEAAENYHVVLTENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQNQTTIELIGDNGELVVSNPLKQGKESRKLFKFNKVFGPTASQEEVFMDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQSRKGSIVYEVGVQMVEIYNEQVRDLLSTNGPQKVGIWNSAQPNGLVVPDASLHTVNSMTDVLELMNIGLMNRVTGSTALNERSSRSHSVLTVHVRGTDLETNTLLRGCLHLVDLAGSERVERSEATGDRLKEAQHINKSLSALGDVISALAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDTASYSETISTLKFAVRVSGVELGAARSNREGRDVKELLEQVTSLKDALARKDEEIERLQQLRTNLSVAKRGMMRYASSSPRRHSTGTSRHSTRLSGAGALRVGEKATSDMDNCSEYSDKHSETGSHQSMDDLRNKPSSPLFKSSKEDTSQNVNDDIDLLGFGEADSEERLSDISDGGLSMGTETDGSICSIVEYTLFPEAEKPAETTPSKSTTTDNLSAANKEKSTVASKIPKAAEVLQKVPTRSSRLSMNRSSSKVSSSIKKTATGSSTSVKAPPKRWQ 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00127 1076 Gene3D Kinesin motor domain 431 818 IPR036961 -
Pral4686g00127 1076 MobiDBLite consensus disorder prediction 1038 1076 - -
Pral4686g00127 1076 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 431 643 - -
Pral4686g00127 1076 PRINTS Kinesin heavy chain signature 564 585 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00127 1076 PRINTS Kinesin heavy chain signature 717 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00127 1076 PRINTS Kinesin heavy chain signature 766 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00127 1076 PRINTS Kinesin heavy chain signature 686 703 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00127 1076 MobiDBLite consensus disorder prediction 865 952 - -
Pral4686g00127 1076 MobiDBLite consensus disorder prediction 874 890 - -
Pral4686g00127 1076 Pfam Calponin homology (CH) domain 38 90 IPR001715 GO:0005515
Pral4686g00127 1076 MobiDBLite consensus disorder prediction 926 943 - -
Pral4686g00127 1076 SUPERFAMILY Calponin-homology domain, CH-domain 39 122 IPR036872 -
Pral4686g00127 1076 SMART kinesin_4 487 824 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00127 1076 ProSiteProfiles Calponin homology (CH) domain profile. 37 156 IPR001715 GO:0005515
Pral4686g00127 1076 MobiDBLite consensus disorder prediction 996 1076 - -
Pral4686g00127 1076 FunFam Kinesin-related protein3 653 858 - -
Pral4686g00127 1076 Coils Coil 830 864 - -
Pral4686g00127 1076 Pfam Kinesin motor domain 495 814 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00127 1076 ProSiteProfiles Kinesin motor domain profile. 489 816 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00127 1076 Coils Coil 317 365 - -
Pral4686g00127 1076 MobiDBLite consensus disorder prediction 907 925 - -
Pral4686g00127 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 854 IPR027417 -
Pral4686g00127 1076 Gene3D - 30 94 IPR036872 -
Pral4686g00127 1076 MobiDBLite consensus disorder prediction 1001 1021 - -
Pral4686g00127 1076 PANTHER KINESIN-LIKE PROTEIN KLP-3 323 1028 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00127 Pral-Chr4686 580728 591228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00127 380 816 Calmodulin-binding Proteins AT5G65930 37.215 3.18e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00127 K10406 - gmx:100777089 1489.17