Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00126 ATGCAGTTGGAACAAAAAGAACTGGGAAACAGGGGAGTTGACAGCTTAAATGGTTATCCTGGTGATGTTAACCCAATAGAAGCTTTCAGAGATTACAATTTGCTTTCAGGCAGCCGGCAGGAATCTCTGGTGGAGTGGATAAATAGTGTGCTTCCTCACTTAAATCTGCCTATAGAAACTTCAGAGGAGGAACTAAGGGCATTGCTGAGGGATGGATCTGTATTATGCAGCATTTTGGACAAGCTGATTCCTGGTTCAGTGGAAGGAGGTTATTCCTTGGATGAGCAAGTAAACATTAGAAAGTTTCTACAGGCCATGGATGAGCTGGGATTGCCTGGATTTGATTTGTCAAGGCTAGAGCAGGGATCGGTAGGGCCTGTATTGCAGTACCTTGAGGGTTTGAAAACTCATTTTGCTTCAAATGTTAAGAGAGAACATATCCAAAAGCTTTCCAGAAAGAGGTGGGATCAATCAGATCTAGCATACTTGGCCCATGGGAGTGAAGAGAGGCTAAAATTTTCTGGTGATTCAAATTTCGAACATGAAGTTGAGGGTTCTGTCCTATCAGATGAAGCACATTATGTTGGATCTAAGTCTAAAGAACTCTTACAGTTGAAACGAGGATGGCATGTGGATCTTTCTGATGAAAAAATTATGGAATTACTCAAATCAAACAGTTTAGATAATGCTTCGACTCAGACGCTTTTTAACATAGGAAATAGGATTATGGATGATATCTTTGGAAGAAAGAATGGAGATGTGCCTCAATCTCAGCATGCAGCATTCCTGTTGAGAAAAATTCTTCAAGTGATAGAGTGGCGTTTTTCTAATCAAGCGGAAAGCCTGAAAAATCAAAACAGTCTTTTCAAGGTTCGTGAAGGGAAGTACCAACTGAAAATAAATGCACTTGAAACTCTGGCAACAGGAACAACTGAAGAGAGTGAGGTTGTCAAAAGTTGGTTACAGCAGTTGAAGTTTGCTCTTCAAGTTGAGAAAACTAAAATGGAGGAGAAAAACAAACTTGATGAGCAGGATGTTGCTCGTTTAAAACAAGAAAAAGTTCATGCTGAAATTGAGATTTCTGCGTTAAAGCAAGAATTGGAAATGGTCAAAAAAGCACATGAAGAGCTCCGTATGCAATCAGAATTATGTGCTGAAGAATGCAAATCTGAATACGAGAAGAGGATATGGGAACTAGAACGTGGTCTTGCTGATGCAGGGAATCAAGCCAACAAATTGGAGGCACTTATGGAATCTAAATCTCTTAGATGGAAGAACAAAGAGAATACCTATCAAAGTTTCATTAACCACCAATTCGGAGCATTCAAGGACTTGAGAGCTGCGATGGAATCTGTAAAAGATGATGTGCTGAAAACAAAAAGAAGCTACTCAGAAGAATTCAAGTATTTGGGGATGAAGCTCAAGAGTCTAGCTGAAGCTGCTGAAAATTATCATGTAGTTCTAACAGAAAATCGGAAATTATATAACGAAGTTCAAGACTTGAAAGGAAATATCCGGGTATATTGTCGAATAAGACCCTTTCTTCCGGGGCAAAGTCAAAACCAGACAACCATTGAATTGATTGGTGATAATGGAGAATTAGTTGTCAGCAATCCTCTCAAACAAGGAAAAGAGAGTCGTAAGCTTTTTAAATTCAACAAGGTTTTTGGTCCAACAGCAAGTCAAGAAGAAGTTTTCATGGACACCCAACCACTAATTCGTTCTGTACTTGACGGGTACAATGTCTGCATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACATATACAATGAGTGGACCTAGCCTATCGTCAAAATCAGACTGGGGAGTCAATTATCGAGCGCTACATGATCTTTTCCATATTTCCCAAAGTAGAAAAGGCTCTATAGTTTATGAAGTTGGTGTTCAAATGGTTGAGATTTATAATGAACAAGTTCGTGATTTACTATCTACAAATGGTCCTCAAAAAGTTGGGATTTGGAATTCTGCCCAACCAAATGGGTTGGTTGTTCCTGATGCAAGCTTGCATACTGTGAATTCAATGACGGATGTGCTGGAGTTGATGAACATTGGACTAATGAATCGGGTAACTGGTTCCACAGCCTTAAATGAAAGAAGTAGCAGATCACATAGTGTTCTTACTGTTCATGTTCGTGGCACGGATTTGGAGACCAACACTTTATTGCGTGGATGTCTACATCTTGTAGATCTTGCAGGGAGTGAGAGAGTAGAGCGCTCTGAAGCCACAGGAGATAGGCTTAAGGAGGCACAACATATAAATAAATCACTATCAGCACTTGGAGATGTGATTTCTGCTCTAGCACAAAAGAGTCCACATGTTCCTTATAGAAATAGTAAATTGACTCAACTTCTTCAAAGTTCGTTAGGTGGTCAAGCAAAAACCCTCATGTTTGTACAGCTTAACCCTGACACTGCTTCGTATTCTGAAACGATAAGCACCTTGAAGTTTGCCGTGAGGGTTTCAGGTGTTGAGCTGGGTGCTGCTCGTAGTAATAGAGAGGGAAGGGATGTCAAAGAACTCTTAGAACAGGTAACATCCCTCAAAGATGCACTTGCTAGGAAGGATGAAGAGATTGAGCGGTTGCAGCAGCTCAGGACAAATCTCAGTGTTGCTAAACGTGGGATGATGAGGTATGCGTCATCATCTCCACGGAGACATTCCACTGGAACTTCGAGGCATAGCACAAGACTTTCTGGAGCTGGGGCCTTGCGAGTTGGTGAAAAAGCAACTTCTGACATGGACAACTGCTCAGAGTATAGTGATAAGCATTCGGAAACTGGTTCTCATCAGTCAATGGACGATCTCAGGAACAAGCCCAGTTCCCCCCTGTTCAAATCATCCAAAGAAGATACAAGTCAGAATGTCAATGACGACATTGATCTCTTGGGATTTGGAGAGGCAGATTCTGAAGAGAGATTAAGTGATATATCTGACGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCTGCAGCATTGTGGAGTACACTCTCTTCCCGGAAGCGGAGAAGCCAGCTGAAACTACCCCAAGTAAGAGCACAACAACAGACAACCTGTCAGCTGCAAACAAAGAGAAATCCACTGTGGCGTCCAAAATTCCCAAAGCCGCAGAAGTTCTACAAAAGGTACCAACAAGATCTTCCAGGTTATCGATGAATAGAAGTTCCTCAAAGGTTTCCTCAAGCATCAAGAAGACGGCTACCGGTAGCTCAACTTCAGTGAAGGCCCCTCCTAAACGATGGCAATGA 3276 0.4154 MQLEQKELGNRGVDSLNGYPGDVNPIEAFRDYNLLSGSRQESLVEWINSVLPHLNLPIETSEEELRALLRDGSVLCSILDKLIPGSVEGGYSLDEQVNIRKFLQAMDELGLPGFDLSRLEQGSVGPVLQYLEGLKTHFASNVKREHIQKLSRKRWDQSDLAYLAHGSEERLKFSGDSNFEHEVEGSVLSDEAHYVGSKSKELLQLKRGWHVDLSDEKIMELLKSNSLDNASTQTLFNIGNRIMDDIFGRKNGDVPQSQHAAFLLRKILQVIEWRFSNQAESLKNQNSLFKVREGKYQLKINALETLATGTTEESEVVKSWLQQLKFALQVEKTKMEEKNKLDEQDVARLKQEKVHAEIEISALKQELEMVKKAHEELRMQSELCAEECKSEYEKRIWELERGLADAGNQANKLEALMESKSLRWKNKENTYQSFINHQFGAFKDLRAAMESVKDDVLKTKRSYSEEFKYLGMKLKSLAEAAENYHVVLTENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQNQTTIELIGDNGELVVSNPLKQGKESRKLFKFNKVFGPTASQEEVFMDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQSRKGSIVYEVGVQMVEIYNEQVRDLLSTNGPQKVGIWNSAQPNGLVVPDASLHTVNSMTDVLELMNIGLMNRVTGSTALNERSSRSHSVLTVHVRGTDLETNTLLRGCLHLVDLAGSERVERSEATGDRLKEAQHINKSLSALGDVISALAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDTASYSETISTLKFAVRVSGVELGAARSNREGRDVKELLEQVTSLKDALARKDEEIERLQQLRTNLSVAKRGMMRYASSSPRRHSTGTSRHSTRLSGAGALRVGEKATSDMDNCSEYSDKHSETGSHQSMDDLRNKPSSPLFKSSKEDTSQNVNDDIDLLGFGEADSEERLSDISDGGLSMGTETDGSICSIVEYTLFPEAEKPAETTPSKSTTTDNLSAANKEKSTVASKIPKAAEVLQKVPTRSSRLSMNRSSSKVSSSIKKTATGSSTSVKAPPKRWQ 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00126 1091 SUPERFAMILY Calponin-homology domain, CH-domain 39 138 IPR036872 -
Pral4686g00126 1091 MobiDBLite consensus disorder prediction 880 964 - -
Pral4686g00126 1091 MobiDBLite consensus disorder prediction 1016 1036 - -
Pral4686g00126 1091 FunFam Kinesin-related protein3 668 873 - -
Pral4686g00126 1091 SMART kinesin_4 502 839 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00126 1091 ProSiteProfiles Calponin homology (CH) domain profile. 37 139 IPR001715 GO:0005515
Pral4686g00126 1091 ProSiteProfiles Kinesin motor domain profile. 504 831 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00126 1091 Pfam Calponin homology (CH) domain 38 138 IPR001715 GO:0005515
Pral4686g00126 1091 MobiDBLite consensus disorder prediction 889 905 - -
Pral4686g00126 1091 Coils Coil 332 380 - -
Pral4686g00126 1091 PANTHER KINESIN-LIKE PROTEIN KLP-3 339 1043 IPR027640 GO:0003777|GO:0007018
Pral4686g00126 1091 Gene3D Kinesin motor domain 446 833 IPR036961 -
Pral4686g00126 1091 SMART ch_5 39 134 IPR001715 GO:0005515
Pral4686g00126 1091 MobiDBLite consensus disorder prediction 941 958 - -
Pral4686g00126 1091 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 446 658 - -
Pral4686g00126 1091 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 869 IPR027417 -
Pral4686g00126 1091 Coils Coil 845 879 - -
Pral4686g00126 1091 Gene3D - 35 142 IPR036872 -
Pral4686g00126 1091 MobiDBLite consensus disorder prediction 1011 1091 - -
Pral4686g00126 1091 Pfam Kinesin motor domain 510 829 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00126 1091 MobiDBLite consensus disorder prediction 1053 1091 - -
Pral4686g00126 1091 PRINTS Kinesin heavy chain signature 701 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00126 1091 PRINTS Kinesin heavy chain signature 732 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00126 1091 PRINTS Kinesin heavy chain signature 579 600 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00126 1091 PRINTS Kinesin heavy chain signature 781 802 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral4686g00126 1091 MobiDBLite consensus disorder prediction 922 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00126 Pral-Chr4686 580728 591228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00126 395 831 Calmodulin-binding Proteins AT5G65930 37.215 3.55e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00126 K10406 - gmx:100777089 1510.35