Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00105 ATGGCTTCCTTTTTCTTCTCGTTGATTTTCGTTTCTGGTTTGTTATTGTTTCATGCAGAAACAGTGAGATGCACGGCTTCCGACGATAACACCCCGAGTTCACCCGTATGTTGCACGAACTCCTCATCGCAGCACCGTCACAGGTGGACGGGCCCTATCGGTTACCGTGTAATCACCGTGGACTTGAACGGCACCGGGCAATTCAGATCAGTGCAAGCTGCCGTCGATTCTGTCCCAGACAACAATCGAATGAACGTCGTCATAAATATCAGCGCCGGATACTACATAGAGAAGGTGGTGGTGCCGGCGACGAAACCGTACATAACGTTTCAGGGAGCGGGGAGGGACGTGACGGTGATAGAATGGCATGACAGGGCCAGCGACCCTGGTCCCAACGGACAGCAGCTGCGTACTTACAGAACTGCTTCTGTTACTGTCTTCGCCAACTATTTCTCCGCCAGGAATATCAGCTTTAAGAACACGGCGCCGGCGCCGATGCCGGGAATGCAGGGATGGCAAGCGGCGGCGTTTCGGATATCGGGGGACAAGGCTTATTTCTCAGGATGCGGCTTCTACGGAGCACAAGACACTTTGTGTGACGACGCCGGCCGCCATTATTTCAAGGACTGCTACATCGAGGGTTCCATCGATTTCATCTTCGGCAATGGCCGCTCCATGTACAAGGATTGCGTGGTGCACTCGATAGCGACGAAATTCGGGTCGATAGCGGCCCACAAGAGAAAACACGTGGACGAGAAGACGGGCTTCACATTCGTACGGTGCAGGGTGACGGGTACGGGCCCACTCTATGTAGGCCGGGCCTTGGGCCAGTACTCCAGAATCGTCTACGCTTATACGTATTTCGATGACATTGTTGCGCCCGAAGGTTGGGACGACTGGAACCACGTGGACAACAAAAACAAGACCGTGTTCTTCGGAGTGTACAAGTGCTGGGGCCCGGGAGCCGCGGCGGCGCGTGGGATGTCTCTGGCCCGTGAGTTGGACTTTGAATCCGCCCATCCGTTTCTCGTGAAGAGCTTCGTCAATGGCAGACACTGGATCGCGCCTTCTGATGCTTAA 1080 0.5472 MASFFFSLIFVSGLLLFHAETVRCTASDDNTPSSPVCCTNSSSQHRHRWTGPIGYRVITVDLNGTGQFRSVQAAVDSVPDNNRMNVVINISAGYYIEKVVVPATKPYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCVVHSIATKFGSIAAHKRKHVDEKTGFTFVRCRVTGTGPLYVGRALGQYSRIVYAYTYFDDIVAPEGWDDWNHVDNKNKTVFFGVYKCWGPGAAAARGMSLARELDFESAHPFLVKSFVNGRHWIAPSDA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00105 359 Gene3D - 56 358 IPR012334 -
Pral4686g00105 359 ProSitePatterns Pectinesterase signature 2. 212 221 IPR033131 -
Pral4686g00105 359 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 53 355 - -
Pral4686g00105 359 FunFam Pectinesterase 54 356 - -
Pral4686g00105 359 Pfam Pectinesterase 58 350 IPR000070 GO:0030599|GO:0042545
Pral4686g00105 359 SUPERFAMILY Pectin lyase-like 56 356 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00105 Pral-Chr4686 510852 513757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4686g00105 1 359 Carbohydrate Esterase AT5G47500 72.207 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00105 - - cam:101501763 596.66