Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4686g00072 ATGACTCGGCGATGTTCTCATTGCAGCCACAATGGCCATAACTCAAGGACTTGCCCGCACCGCGGTGTTAAGCTCTTTGGAGTTCGATTGACCGATGGCTCGATCCGGAAGAGTGCAAGTCTGAGTAGTCTCAGCCACTATGCTGGGTCGAGCTCCGGAGCTCATCATGCTGGGTCCGTCAATCCGGGTTCGCCCGGTGACACGCCTGATCATGGTGCTGCACCCGACGGTTACGCCTCCGAGGATTTTGTTCCTGGGTCATCATCAGTTTCCCGGGAGAGGAAGAAGGGTGTTCCTTGGACTGAGGAGGAGCATAGATTGTTCTTACTTGGATTGCAGAAGCTTGGCAAAGGTGATTGGCGCGGAATTGCCCGTAATTATGTTATATCAAGGACACCAACTCAAGTAGCAAGCCATGCTCAGAAATATTTCATCAGGCAGAGCAACGTATCTAGGAGGAAAAGACGTTCAAGTCTGTTTGACATTGTTGCTGATGAAACTGCTGATACACCAATGGCAGAACAAGACTTCTTGCCGCCTTGTCAGCCAGAGGCCGAAACAGAAGGCAATGATCCCCTGTCAGCTCCCCCAGCCATTGATGAAGAGTGTGAATCCATGGATTCCGATAATTCAAATGATGGAGACTCTGCCTCTTTAAAGCCAGATAGCTCACAGTCATACTCGCAATTCCCAGTGATATATCCTGCTTACTTTTCTCCTTTCTCCCCATTTCCTTTGCCTTATTGGTCTGGATACAGTCCAGAGCCCACCAAGAAGGAGACAGTACATGAAGTGCTGAAGCCTACTGCAGTACATTCTAAAAGCCCCATCAATGTTGATGAATTGGTTGGCATGTCAAAACTCAGTTTAGGGGACTCTATCGGTGACTCTGGCCCTTCCTCTCTTTCATTAAAACTCCTCAAGGGGCCCTCTCGGCAATCAGCTTTTCATGTAACTCCCTCATATGGTAATTCAGACATGAATGGCAATGCAATCCCTGCAGTTTAA 1008 0.4871 MTRRCSHCSHNGHNSRTCPHRGVKLFGVRLTDGSIRKSASLSSLSHYAGSSSGAHHAGSVNPGSPGDTPDHGAAPDGYASEDFVPGSSSVSRERKKGVPWTEEEHRLFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADETADTPMAEQDFLPPCQPEAETEGNDPLSAPPAIDEECESMDSDNSNDGDSASLKPDSSQSYSQFPVIYPAYFSPFSPFPLPYWSGYSPEPTKKETVHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIGDSGPSSLSLKLLKGPSRQSAFHVTPSYGNSDMNGNAIPAV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4686g00072 335 MobiDBLite consensus disorder prediction 1 20 - -
Pral4686g00072 335 MobiDBLite consensus disorder prediction 45 98 - -
Pral4686g00072 335 MobiDBLite consensus disorder prediction 170 223 - -
Pral4686g00072 335 Gene3D - 98 150 - -
Pral4686g00072 335 FunFam transcription factor MYB1R1 98 149 - -
Pral4686g00072 335 CDD SANT 99 144 IPR001005 -
Pral4686g00072 335 PANTHER TRANSCRIPTION FACTOR KUA1 3 273 - -
Pral4686g00072 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Pral4686g00072 335 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Pral4686g00072 335 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Pral4686g00072 335 SMART sant 96 146 IPR001005 -
Pral4686g00072 335 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Pral4686g00072 335 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Pral4686g00072 335 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4686g00072 Pral-Chr4686 388526 391383 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4686g00072 Myb_DNA-binding 3.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4686g00072 - - pcin:129311785 510.76